gene detail

Gene description

TAIR ID: AT4G36800

Short description: RUB1 conjugating enzyme 1

Pathogen responsiveness: -2.24

General responsiveness: -2.90

Orthologous

Rice:

Maize:

Wheat: No orthologous gene

GO biological process

embryo development, protein neddylation, response to auxin

GO cellular component

cytoplasm

GO molecular function

ubiquitin-like protein transferase activity, NEDD8 transferase activity, ATP binding, protein binding, ligase activity

Protein domain

Pfam	PF00179, Ubiquitin-conjugating enzyme
SMART	SM00212, UBCc

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

PATH:ath04120: Ubiquitin mediated proteolysis

Transcriptional regulation

Regulator:
AT3G16857, AT4G16110

Target:
none

Protein-protein interaction network

The number of partners (degree) is: 5

Coexpression network

GSE26679_WT_GC view
GSE26679_EDR1_GC view

Differentially expressed condition

4 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE17464	Laer, control	Laer, Alternaria brassicicola 3 d	-1.75	4.31E-08
GSE17464	Laer, control	Laer, PstDC3000 12 h	-1.73	7.32E-08
GSE17464	Penta, control	Penta, Alternaria brassicicola 3 d	-1.99	1.12E-09
GSE17464	Penta, control	Penta, PstDC3000 12 h	-1.64	1.85E-07