Gene: AT4G35050
     

Gene description


TAIR ID: AT4G35050

Short description: Transducin family protein / WD-40 repeat family protein

Pathogen responsiveness: -1.69

General responsiveness: -1.06

Orthologous


Rice: No orthologous gene
Maize: No orthologous gene
Wheat: No orthologous gene

GO biological process


transcription, DNA-templated, regulation of transcription, covalent chromatin modification


GO cellular component


Cul4-RING E3 ubiquitin ligase complex, nucleus


GO molecular function


protein binding


Protein domain


PfamPF00400, WD domain, G-beta repeat
PfamPF12265, Histone-binding protein RBBP4 or subunit C of CAF1 complex
SMARTSM00320, WD40

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT5G53660

Target:
none

Protein-protein interaction network


The number of partners (degree) is: 2

click to view PPI network

Differentially expressed condition


6 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE17464Penta, controlPenta, PstDC3000 12 h1.738.30E-06
GSE26679Col, WT, GC 0 hCol, WT, GC 18 h1.763.39E-08
GSE26679Col, WT, GC 0 hCol, WT, GC 36 h2.071.73E-09
GSE26679Col, edr1, GC 0 hCol, edr1, GC 18 h1.571.95E-07
GSE26679Col, edr1, GC 0 hCol, edr1, GC 36 h2.183.97E-10
GSE37269Ei2, WT, controlEi2, WT, TEV 21 d-1.782.13E-02






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