Gene: AT4G34470
     

Gene description


TAIR ID: AT4G34470

Short description: SKP1-like 12

Pathogen responsiveness: NA

General responsiveness: NA

Orthologous


Rice: No orthologous gene
Maize: No orthologous gene
Wheat: No orthologous gene

GO biological process


protein ubiquitination, ubiquitin-dependent protein catabolic process


GO cellular component


nucleus


GO molecular function


ubiquitin-protein transferase activity


Protein domain


PfamPF03931, Skp1 family, tetramerisation domain
PfamPF01466, Skp1 family, dimerisation domain
SMARTSM00512, Skp1

Metabolic pathway


Not involved in metabolic pathway


Transcriptional regulation


Regulator:
AT3G20770

Target:
none

Protein-protein interaction network


The number of partners (degree) is: 73 (Top5%)

click to view PPI network

Coexpression network


No coexpression gene


Differentially expressed condition


4 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE37269St0, WT, controlSt0, WT, TEV 21 d-2.177.01E-04
GSE37269Wt1, WT, controlWt1, WT, TEV 21 d-2.507.00E-04
GSE52979Col, WT, acetoneCol, WT, acetone flg22_2 h2.986.14E-07
GSE52979Col, WT, oxo_C14_HSLCol, WT, oxo_C14_HSL flg22_2 h3.172.34E-07






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