Gene: AT4G34210
Gene description
TAIR ID: AT4G34210
Short description: SKP1-like 11
Pathogen responsiveness: NA
General responsiveness: -1.35
Orthologous
Rice: No orthologous gene
Maize: No orthologous gene
Wheat: No orthologous gene
GO biological process
protein ubiquitination, ubiquitin-dependent protein catabolic process
GO cellular component
nucleus
GO molecular function
ubiquitin-protein transferase activity, protein binding
Protein domain
| Pfam | PF01466, Skp1 family, dimerisation domain |
| Pfam | PF03931, Skp1 family, tetramerisation domain |
| SMART | SM00512, Skp1 |
Metabolic pathway
Not involved in metabolic pathway
KEGG pathway
PATH:ath04141: Protein processing in endoplasmic reticulum
PATH:ath04120: Ubiquitin mediated proteolysis
Protein-protein interaction network
The number of partners (degree) is: 91 (Top5%)
click to view PPI networkCoexpression network
Differentially expressed condition 
13 conditions
| Series | Control | Treatment | Log2FC | Adj. P value |
|---|---|---|---|---|
| GSE21920 | Col, WT, mock | Col, WT, Pto HopZ1a 6 h | 2.08 | 1.93E-06 |
| GSE37269 | St0, WT, control | St0, WT, TEV 21 d | -2.38 | 3.26E-04 |
| GSE37269 | Wt1, WT, control | Wt1, WT, TEV 21 d | -2.43 | 1.38E-03 |
| GSE45214 | Col, med16, PstDC3000 AvrRpt2 0 h | Col, med16, PstDC3000 AvrRpt2 4 h | 1.53 | 7.06E-08 |
| GSE50526 | Col, WT, mock 24 h | Col, WT, A. brassicicola 24 h | 2.59 | 3.21E-02 |
| GSE50526 | Col, WT, mock 9 h | Col, WT, A. brassicicola 9 h | 4.87 | 7.42E-05 |
| GSE52979 | Col, WT, acetone | Col, WT, acetone flg22_2 h | 2.86 | 8.40E-10 |
| GSE52979 | Col, WT, oxo_C14_HSL | Col, WT, oxo_C14_HSL flg22_2 h | 3.03 | 3.25E-10 |
| GSE5520 | Col, WT, control 7 h | Col, WT, PstDC3000 7 h | 1.91 | 1.14E-05 |
| GSE58954 | Col, WT, Psm AvrRpt2 0 h | Col, WT, Psm AvrRpt2 6 h | 1.94 | 9.13E-03 |
| GSE6176 | Col, WT, control 12 h | Col, WT, PstDC3000 12 h | 1.53 | 4.33E-02 |
| GSE6176 | Col, WT, control 4 h | Col, WT, PstDC3000 AvrRpm1 4 h | 3.05 | 1.14E-03 |
| GSE67100 | pDMR6:GFP GFP-negative, control 7 d | pDMR6:GFP GFP-positive, Hpa Noks1 7 d | -3.05 | 4.05E-02 |
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