gene detail

Gene description

TAIR ID: AT4G34040

Short description: RING/U-box superfamily protein

Pathogen responsiveness: -3.06

General responsiveness: -2.43

Orthologous

Rice: No orthologous gene

Maize:

GRMZM2G174926

Wheat: No orthologous gene

GO biological process

protein ubiquitination, flower development, proteasome-mediated ubiquitin-dependent protein catabolic process, vegetative to reproductive phase transition of meristem, regulation of growth

GO cellular component

nucleus

GO molecular function

metal ion binding, ubiquitin protein ligase activity, protein binding

Protein domain

Pfam	PF13639, Ring finger domain
SMART	SM00184, RING

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

Regulator:
AT5G13790

Target:
none

Protein-protein interaction network

The number of partners (degree) is: 1

click to view PPI network

Coexpression network

GSE45212_WT_PSTDC3000_AVRRPT2  view
GSE26679_WT_GC  view
GSE13739_WT_GO  view
GSE5686_WT_GO  view
GSE56094_WT_PSTDC3000  view
GSE45212_MED14_PSTDC3000_AVRRPT2  view

Differentially expressed condition

1 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE37269	St0, WT, control	St0, WT, TEV 21 d	-1.58	1.27E-02