Gene: AT4G33990
     

Gene description


TAIR ID: AT4G33990

Short description: Tetratricopeptide repeat (TPR)-like superfamily protein

Pathogen responsiveness: -2.70

General responsiveness: -4.61

Orthologous


Rice: No orthologous gene
Maize:

GRMZM2G340279  

Wheat: No orthologous gene

GO biological process


embryo development ending in seed dormancy, RNA modification


GO cellular component


intracellular membrane-bounded organelle, mitochondrion


GO molecular function


RNA binding, zinc ion binding, endonuclease activity


Protein domain


PfamPF13041, PPR repeat family
PfamPF01535, PPR repeat
PfamPF14432, DYW family of nucleic acid deaminases

KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT5G13790, AT1G73805, AT5G26920

Target:
none

Protein-protein interaction network


No Interactor


Coexpression network


No coexpression gene


Differentially expressed condition


4 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE26679Col, edr1, GC 0 hCol, edr1, GC 18 h1.641.22E-03
GSE26679Col, edr1, GC 0 hCol, edr1, GC 36 h1.921.89E-04
GSE37269Ei2, WT, controlEi2, WT, TEV 21 d-1.732.21E-02
GSE37269St0, WT, controlSt0, WT, TEV 21 d-1.642.05E-02






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