Gene: AT4G29950
     


Gene description


TAIR ID: AT4G29950

Short description: Ypt/Rab-GAP domain of gyp1p superfamily protein

Pathogen responsiveness: -0.56

General responsiveness: -1.36

Orthologous


Rice:

OS08G0518100  

Maize:

GRMZM2G005652  

Wheat: No orthologous gene

GO biological process


unkown


GO cellular component


cytoplasm


GO molecular function


unkown


Protein domain


PfamPF00566, Rab-GTPase-TBC domain
SMARTSM00164, TBC

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT5G13790, AT5G61850

Target:
none

Protein-protein interaction network


No Interactor


Differentially expressed condition


13 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE17464Laer, controlLaer, Alternaria brassicicola 3 d-1.925.72E-11
GSE17464Penta, controlPenta, Alternaria brassicicola 3 d-1.721.81E-09
GSE17500Col, WT, control 0 hCol, WT, PstDC3000 24 h1.853.97E-06
GSE18978Col, WT, control 24 hCol, WT, PsmES4326 24 h1.952.90E-10
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 12 h2.091.39E-13
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 8 h1.984.57E-13
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 12 h2.012.80E-13
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 4 h2.442.37E-14
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 8 h2.372.52E-14
GSE45214Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 4 h1.786.98E-11
GSE45214Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 4 h1.633.09E-10
GSE45214Col, med16, PstDC3000 AvrRpt2 0 hCol, med16, PstDC3000 AvrRpt2 4 h2.131.88E-12
GSE9674Ws-4, AtMYB30 ox, controlWs-4, AtMYB30 ox, Xanthomonas strain Xcc147 6 h1.516.39E-03






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