Gene: AT4G27230
     


Gene description


TAIR ID: AT4G27230

Short description: histone H2A 2

Pathogen responsiveness: -1.19

General responsiveness: -1.56

GO biological process


chromatin silencing


GO cellular component


nuclear chromatin, nucleus, nucleosome


GO molecular function


DNA binding, protein heterodimerization activity


Protein domain


PfamPF00125, Core histone H2A/H2B/H3/H4
PfamPF16211, C-terminus of histone H2A
SMARTSM00414, H2A

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT5G61850, AT4G31800

Target:
none

Protein-protein interaction network


The number of partners (degree) is: 4

click to view PPI network

Differentially expressed condition


4 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE5520Col, WT, control 10 hCol, WT, Cor- 10 h-1.976.93E-04
GSE5520Col, WT, control 24 hCol, WT, PstDC3000 24 h-1.696.81E-03
GSE5520Col, WT, control 7 hCol, WT, PstDC3000 7 h-2.281.11E-05
GSE58954Col, WT, Psm AvrRpt2 0 hCol, WT, Psm AvrRpt2 6 h-1.841.49E-03






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