Gene: AT4G25540
     

Gene description


TAIR ID: AT4G25540

Short description: homolog of DNA mismatch repair protein MSH3

Pathogen responsiveness: -3.51

General responsiveness: -3.68

Orthologous


Rice:

OS04G0682900  

Maize: No orthologous gene
Wheat: No orthologous gene

GO biological process


mismatch repair, maintenance of DNA repeat elements


GO cellular component


nucleus, mismatch repair complex


GO molecular function


ATP binding, protein binding, heteroduplex DNA loop binding, DNA-dependent ATPase activity


Protein domain


PfamPF01624, MutS domain I
PfamPF05190, MutS family domain IV
PfamPF00488, MutS domain V
PfamPF05188, MutS domain II
PfamPF05192, MutS domain III
SMARTSM00533, MUTSd
SMARTSM00534, MUTSac

Metabolic pathway


Not involved in metabolic pathway


Transcriptional regulation


Regulator:
AT2G36010, AT5G02470

Target:
none

Protein-protein interaction network


The number of partners (degree) is: 1

click to view PPI network

Coexpression network


No coexpression gene


Differentially expressed condition


Copyright © 2017 Ziding Zhang's Lab - China Agricultural University. All Rights Reserved.