gene detail

Gene description

TAIR ID: AT4G23680

Short description: Polyketide cyclase/dehydrase and lipid transport superfamily protein

Pathogen responsiveness: 1.09

General responsiveness: 1.20

Orthologous

Rice: No orthologous gene

Maize: No orthologous gene

Wheat: No orthologous gene

GO biological process

defense response, response to biotic stimulus

GO cellular component

cellular_component

GO molecular function

molecular_function

Protein domain

Pfam	PF00407, Pathogenesis-related protein Bet v I family
SMART	SM01037, Bet_v_1

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

Regulator:
AT5G56110, AT3G16857, AT4G16110

Target:
none

Protein-protein interaction network

The number of partners (degree) is: 3

click to view PPI network

Coexpression network

GSE26679_WT_GC  view
GSE56094_WT_HRPA-  view
GSE13739_EDS16_GO  view
GSE56094_WT_PSTDC3000  view

Differentially expressed condition

23 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE17464	Laer, control	Laer, Alternaria brassicicola 3 d	1.86	5.94E-03
GSE17464	Penta, control	Penta, Alternaria brassicicola 3 d	4.35	6.48E-10
GSE17500	Col, 35S:AFB1, control 0 h	Col, 35S:AFB1, PstDC3000 24 h	3.88	8.78E-05
GSE17500	Col, WT, control 0 h	Col, WT, PstDC3000 24 h	4.36	1.77E-05
GSE17500	Col, miR393, control 0 h	Col, miR393, PstDC3000 24 h	4.29	3.23E-05
GSE18978	Col, WT, control 24 h	Col, WT, PsmES4326 24 h	6.22	1.17E-10
GSE20278	Col, RPL18-HF, control, polysomal RNA	Col, RPL18-HF, TuMV 10 d, polysomal RNA	2.09	4.57E-03
GSE20278	Col, RPL18-HF, control	Col, RPL18-HF, TuMV 10 d	2.85	8.36E-04
GSE2169	Col, WT, water	Col, WT, chitin 30 min	-1.63	1.25E-04
GSE26679	Col, WT, GC 0 h	Col, WT, GC 96 h	3.36	6.83E-08
GSE26679	Col, edr1, GC 0 h	Col, edr1, GC 96 h	3.35	8.14E-08
GSE37269	St0, WT, control	St0, WT, TEV 21 d	-2.18	1.06E-03
GSE40544	Col, WT, control	Col, WT, PstDC3000 EV	1.74	6.57E-05
GSE40544	Col, Sid2, control	Col, Sid2, PstDC3000 EV	2.34	1.19E-05
GSE50526	Col, WT, mock 24 h	Col, WT, A. brassicicola 24 h	6.63	5.19E-07
GSE52979	Col, WT, acetone	Col, WT, acetone flg22_24 h	-4.86	3.57E-02
GSE52979	Col, WT, oxo_C14_HSL	Col, WT, oxo_C14_HSL flg22_24 h	-4.97	3.00E-02
GSE5520	Col, WT, control 24 h	Col, WT, PstDC3000 24 h	4.37	4.81E-06
GSE56094	Col, WT, control 11 h	Col, WT, PstDC3000 11 h	1.74	8.78E-09
GSE56094	Col, WT, control 12 h	Col, WT, PstDC3000 12 h	1.99	1.22E-10
GSE56094	Col, WT, control 9 h	Col, WT, PstDC3000 9 h	1.88	1.67E-09
GSE6556	Col, WT, control	Col, WT, PstDC3000 AvrRpt2 48 h	2.47	1.24E-02
GSE6556	Col, gh3.5, control	Col, gh3.5, PstDC3000 AvrRpt2 48 h	4.12	8.13E-05