gene detail

Gene description

TAIR ID: AT4G23570

Short description: phosphatase-related

Pathogen responsiveness: 0.45

General responsiveness: 0.95

Orthologous

Rice: No orthologous gene

Maize:

GRMZM2G149704 GRMZM2G105019

Wheat:

TA.2286.1.S1_AT

GO biological process

defense response, ubiquitin-dependent protein catabolic process, regulation of defense response to fungus, incompatible interaction, cellular response to auxin stimulus, innate immune response

GO cellular component

nucleus, SCF ubiquitin ligase complex

GO molecular function

protein binding

Protein domain

Pfam	PF04969, CS domain
Pfam	PF05002, SGS domain
Pfam	PF13181, Tetratricopeptide repeat
Pfam	PF14559, Tetratricopeptide repeat
SMART	SM00028, TPR

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

PATH:ath04626: Plant-pathogen interaction

Transcriptional regulation

Regulator:
AT2G38250, AT4G36990

Target:
none

Protein-protein interaction network

The number of partners (degree) is: 8

click to view PPI network

Coexpression network

GSE45212_WT_PSTDC3000_AVRRPT2  view
GSE26679_WT_GC  view
GSE13739_WT_GO  view
GSE13739_EDS16_GO  view
GSE5686_WT_GO  view
GSE56094_WT_PSTDC3000  view
GSE45212_MED14_PSTDC3000_AVRRPT2  view
GSE26679_EDR1_GC  view

Differentially expressed condition

22 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE12856	Col, WT, control	Col, WT, Bg h	2.35	2.02E-09
GSE12856	Col, ataf1, control	Col, ataf1, Bg h	2.75	5.08E-10
GSE26679	Col, WT, GC 0 h	Col, WT, GC 96 h	1.65	1.11E-08
GSE26679	Col, edr1, GC 0 h	Col, edr1, GC 96 h	1.62	2.14E-08
GSE45212	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 4 h	1.65	3.72E-09
GSE45212	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 8 h	2.91	5.58E-13
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 4 h	4.11	4.71E-15
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 8 h	2.34	7.76E-12
GSE45214	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 4 h	3.40	7.73E-13
GSE45214	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 4 h	1.86	6.10E-09
GSE45214	Col, med16, PstDC3000 AvrRpt2 0 h	Col, med16, PstDC3000 AvrRpt2 4 h	3.71	7.82E-14
GSE45214	Col, npr1, PstDC3000 AvrRpt2 0 h	Col, npr1, PstDC3000 AvrRpt2 4 h	3.17	3.04E-12
GSE52979	Col, WT, acetone	Col, WT, acetone flg22_2 h	1.90	7.03E-10
GSE52979	Col, WT, oxo_C14_HSL	Col, WT, oxo_C14_HSL flg22_2 h	2.06	1.97E-10
GSE56094	Col, WT, control 3 h	Col, WT, PstDC3000 3 h	1.51	1.71E-04
GSE58954	Col, WT, Psm AvrRpt2 0 h	Col, WT, Psm AvrRpt2 6 h	2.78	5.86E-04
GSE9674	Ws-4, AtMYB30 ox, control	Ws-4, AtMYB30 ox, Xanthomonas strain Xcc147 2-4 h	2.74	3.45E-05
GSE9674	Ws-4, AtMYB30 ox, control	Ws-4, AtMYB30 ox, Xanthomonas strain Xcc147 6 h	3.06	4.53E-05
GSE9674	Ws-4, AtMYB30 ox, control	Ws-4, AtMYB30 ox, Xanthomonas strain Xcc147 90-105 min	2.75	7.19E-05
GSE9674	Ws-4, WT, control	Ws-4, WT, Xanthomonas strain Xcc147 2-4 h	2.80	4.30E-05
GSE9674	Ws-4, WT, control	Ws-4, WT, Xanthomonas strain Xcc147 6 h	3.14	4.38E-05
GSE9674	Ws-4, WT, control	Ws-4, WT, Xanthomonas strain Xcc147 90-105 min	2.64	2.87E-05