gene detail

Gene description

TAIR ID: AT4G23450

Short description: RING/U-box superfamily protein

Pathogen responsiveness: -0.94

General responsiveness: 0.84

Orthologous

Rice: No orthologous gene

Maize: No orthologous gene

Wheat: No orthologous gene

GO biological process

positive regulation of abscisic acid-activated signaling pathway, response to water deprivation, response to abscisic acid, positive regulation of hydrogen peroxide biosynthetic process

GO cellular component

nucleus, cytoplasm

GO molecular function

ubiquitin-protein transferase activity

Protein domain

Pfam	PF13639, Ring finger domain
SMART	SM00184, RING

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

Regulator:
AT1G13450

Target:
none

Protein-protein interaction network

The number of partners (degree) is: 2

click to view PPI network

Coexpression network

GSE45212_WT_PSTDC3000_AVRRPT2  view
GSE13739_WT_GO  view
GSE13739_EDS16_GO  view
GSE5686_WT_GO  view
GSE56094_WT_PSTDC3000  view
GSE45212_MED14_PSTDC3000_AVRRPT2  view

Differentially expressed condition

7 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE17500	Col, 35S:AFB1, control 0 h	Col, 35S:AFB1, PstDC3000 24 h	1.57	6.98E-05
GSE17500	Col, WT, control 0 h	Col, WT, PstDC3000 24 h	1.80	1.14E-05
GSE18978	Col, WT, control 24 h	Col, WT, PsmES4326 24 h	1.66	5.59E-07
GSE37269	St0, WT, control	St0, WT, TEV 21 d	-1.80	4.90E-04
GSE40544	Col, WT, control	Col, WT, PstDC3000 AvrRpt2	1.85	9.83E-05
GSE40544	Col, WT, control	Col, WT, PstDC3000 EV	1.73	1.66E-04
GSE5520	Col, WT, control 10 h	Col, WT, Cor- 10 h	2.13	6.71E-04