Gene: AT4G20000
     

Gene description


TAIR ID: AT4G20000

Short description: VQ motif-containing protein

Pathogen responsiveness: 1.90

General responsiveness: 1.58

Orthologous


Rice: No orthologous gene
Maize: No orthologous gene
Wheat: No orthologous gene

GO biological process


biological_process


GO cellular component


nucleus


GO molecular function


molecular_function


Protein domain


PfamPF05678, VQ motif

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT3G20770

Target:
none

Protein-protein interaction network


The number of partners (degree) is: 3

click to view PPI network

Differentially expressed condition


71 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE12856Col, WT, controlCol, WT, Bg h1.817.99E-07
GSE12856Col, ataf1, controlCol, ataf1, Bg h2.582.40E-08
GSE13739Col, WT, control 7 dCol, WT, G.orontii 7 d2.772.45E-20
GSE17382Col, WT, Flg22 0 minCol, WT, Flg22 30 min3.702.25E-02
GSE17382Col, WT, Flg22 0 minCol, WT, Flg22 60min4.201.73E-02
GSE17464Laer, JA+Flg22 0 hLaer, JA+Flg22 1 h2.182.02E-02
GSE17464Laer, controlLaer, Alternaria brassicicola 3 d-2.032.05E-02
GSE17464Laer, controlLaer, Flg22 1 h2.798.73E-04
GSE17464Laer, controlLaer, Flg22 2 h2.651.39E-03
GSE17464Penta, controlPenta, Alternaria brassicicola 3 d-2.021.92E-02
GSE17464Penta, controlPenta, Flg22 2 h2.751.01E-03
GSE17464Penta, controlPenta, Flg22 2 h2.571.79E-03
GSE18329Col, WT, controlCol, WT, Hpa noco2 96 h1.592.69E-09
GSE18329Col, wrky72_1, controlCol, wrky72_1, Hpa noco2 96 h2.211.16E-11
GSE18329Col, wrky72_1, controlCol, wrky72_2, Hpa noco2 96 h2.006.41E-11
GSE18978Col, WT, control 24 hCol, WT, PsmES4326 24 h1.733.30E-03
GSE2169Col, WT, waterCol, WT, chitin 30 min2.332.04E-10
GSE2169Col, rre1, waterCol, rre1, chitin 30 min2.845.08E-12
GSE2169Col, rre2, waterCol, rre2, chitin 30 min2.379.88E-11
GSE2538Col, WT, controlCol, WT, crab shell chitin 30 min3.264.94E-06
GSE2538Col, WT, controlCol, WT, purified chitin octamer 30 min3.235.87E-06
GSE26679Col, WT, GC 0 hCol, WT, GC 96 h4.233.72E-04
GSE26679Col, edr1, GC 0 hCol, edr1, GC 96 h2.701.14E-02
GSE37269Di2, WT, controlDi2, WT, TEV 21 d2.646.21E-05
GSE37269Ler0, WT, controlLer0, WT, TEV 21 d3.451.92E-08
GSE40544Col, WT, controlCol, WT, PstDC3000 AvrRpt22.294.43E-05
GSE40544Col, WT, controlCol, WT, PstDC3000 EV3.911.29E-07
GSE40544Col, Sid2, controlCol, Sid2, PstDC3000 AvrRpt21.942.21E-04
GSE40544Col, Sid2, controlCol, Sid2, PstDC3000 EV1.945.61E-04
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 4 h1.839.23E-10
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 8 h1.691.09E-09
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 12 h1.582.57E-09
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 4 h2.378.68E-12
GSE45214Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 4 h3.781.03E-12
GSE45214Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 4 h2.925.90E-11
GSE45214Col, med16, PstDC3000 AvrRpt2 0 hCol, med16, PstDC3000 AvrRpt2 4 h2.872.44E-11
GSE45214Col, npr1, PstDC3000 AvrRpt2 0 hCol, npr1, PstDC3000 AvrRpt2 4 h4.007.03E-13
GSE4746Col, WT, water 30 minCol, WT, chitooctaose 30 min3.552.49E-04
GSE50526Col, WT, mock 9 hCol, WT, A. brassicicola 9 h2.893.61E-03
GSE52979Col, WT, acetoneCol, WT, acetone flg22_24 h2.351.96E-06
GSE52979Col, WT, acetoneCol, WT, acetone flg22_2 h3.432.70E-09
GSE52979Col, WT, oxo_C14_HSLCol, WT, oxo_C14_HSL flg22_24 h2.331.89E-06
GSE52979Col, WT, oxo_C14_HSLCol, WT, oxo_C14_HSL flg22_2 h3.923.81E-10
GSE5520Col, WT, control 10 hCol, WT, Cor- hrpS- 10 h2.001.49E-02
GSE5520Col, WT, control 7 hCol, WT, E.coli_0157_H7 7 h2.095.00E-03
GSE5520Col, WT, control 7 hCol, WT, E.coli_TUV86 flic- 7 h2.192.25E-03
GSE5520Col, WT, control 7 hCol, WT, hrpA- 10 h2.534.24E-04
GSE5520Col, WT, control 7 hCol, WT, Cor- hrpA- flic- 7 h2.092.26E-02
GSE56094Col, WT, control 10 hCol, WT, hrpA- 10 h2.014.87E-07
GSE56094Col, WT, control 11 hCol, WT, hrpA- 11 h1.804.30E-06
GSE56094Col, WT, control 12 hCol, WT, hrpA- 12 h1.762.23E-05
GSE56094Col, WT, control 13 hCol, WT, hrpA- 13 h2.191.53E-07
GSE56094Col, WT, control 2 hCol, WT, hrpA- 2 h2.042.00E-06
GSE56094Col, WT, control 3 hCol, WT, hrpA- 3 h1.742.62E-05
GSE56094Col, WT, control 5 hCol, WT, hrpA- 5 h1.639.64E-05
GSE56094Col, WT, control 6 hCol, WT, hrpA- 6 h2.606.19E-10
GSE56094Col, WT, control 7 hCol, WT, hrpA- 7 h1.561.19E-04
GSE56094Col, WT, control 8 hCol, WT, hrpA- 8 h2.521.34E-09
GSE56094Col, WT, control 9 hCol, WT, hrpA- 9 h2.016.29E-07
GSE5615Col, WT, GST 4 hCol, WT, GST+NPP1 4 h2.421.71E-06
GSE5615Col, WT, water 4 hCol, WT, Flg22 4 h1.515.77E-04
GSE5615Col, WT, water 4 hCol, WT, HrpZ 4 h3.572.59E-10
GSE6176Col, WT, control 12 hCol, WT, PstDC3000 HrpA- 12 h2.133.15E-02
GSE67100pDMR6:GFP GFP-negative, control 5 dpDMR6:GFP GFP-positive, Hpa Noks1 5 d5.001.66E-02
GSE67100pDMR6:GFP GFP-negative, control 7 dpDMR6:GFP GFP-positive, Hpa Noks1 7 d5.547.12E-03
GSE8319Col, WT, controlCol, WT, chitooctaose 30 min2.588.48E-15
GSE9674Ws-4, AtMYB30 ox, controlWs-4, AtMYB30 ox, Xanthomonas strain Xcc147 2-4 h3.297.89E-04
GSE9674Ws-4, AtMYB30 ox, controlWs-4, AtMYB30 ox, Xanthomonas strain Xcc147 6 h2.092.33E-02
GSE9674Ws-4, WT, controlWs-4, WT, Xanthomonas strain Xcc147 2-4 h3.031.78E-03
GSE9674Ws-4, WT, controlWs-4, WT, Xanthomonas strain Xcc147 6 h3.073.34E-03
GSE9674Ws-4, WT, controlWs-4, WT, Xanthomonas strain Xcc147 90-105 min1.741.63E-02






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