gene detail

Gene description

TAIR ID: AT4G19810

Short description: Glycosyl hydrolase family protein with chitinase insertion domain

Pathogen responsiveness: 1.06

General responsiveness: 1.55

Orthologous

Rice: No orthologous gene

Maize:

AC211652.4_FGT003 GRMZM2G141456

Wheat: No orthologous gene

GO biological process

response to abscisic acid, carbohydrate metabolic process, response to jasmonic acid, response to salt stress, chitin catabolic process

GO cellular component

extracellular region, cell wall

GO molecular function

endochitinase activity, exochitinase activity, chitin binding, hydrolase activity, hydrolyzing O-glycosyl compounds

Protein domain

Pfam	PF00704, Glycosyl hydrolases family 18
SMART	SM00636, Glyco_18

Metabolic pathway

PWY-6902: chitin degradation II

KEGG pathway

PATH:ath00520: Amino sugar and nucleotide sugar metabolism

Transcriptional regulation

Regulator:
AT5G56110, AT5G61850

Target:
none

Protein-protein interaction network

The number of partners (degree) is: 1

click to view PPI network

Coexpression network

GSE56094_WT_HRPA-  view
GSE13739_WT_GO  view
GSE13739_EDS16_GO  view
GSE56094_WT_PSTDC3000  view
GSE45212_MED14_PSTDC3000_AVRRPT2  view

Differentially expressed condition

48 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE11807	Col, ERF104 ox, water 4 h	Col, ERF104 ox, Flg22 4 h	2.06	1.97E-02
GSE11807	Col, WT, water 4 h	Col, WT, Flg22 4 h	1.62	4.34E-02
GSE12856	Col, WT, control	Col, WT, Bg h	2.27	6.23E-08
GSE12856	Col, ataf1, control	Col, ataf1, Bg h	2.02	1.14E-07
GSE13739	Col, eds, control 7 d	Col, eds, G.orontii 7 d	2.14	2.07E-11
GSE17464	Laer, JA+Flg22 0 h	Laer, JA+Flg22 1 h	2.21	1.51E-02
GSE17464	Laer, JA+Flg22 0 h	Laer, JA+Flg22 2 h	2.48	4.59E-03
GSE17464	Laer, control	Laer, Flg22 1 h	2.89	3.86E-04
GSE17464	Laer, control	Laer, Flg22 2 h	3.41	4.65E-05
GSE17464	Penta, control	Penta, Flg22 2 h	2.20	6.96E-03
GSE17464	Penta, control	Penta, Flg22 2 h	2.41	2.55E-03
GSE18978	Col, WT, control 24 h	Col, WT, PsmES4326 24 h	3.41	2.33E-08
GSE21920	Col, WT, mock	Col, WT, Pto HopZ1a 6 h	1.79	9.79E-06
GSE21920	Col, WT, mock	Col, WT, Pto HopZ1a C216aA 6 h	1.89	6.34E-05
GSE21920	Col, ulp1, mock	Col, ulp1, Pto 6 h	1.55	3.47E-04
GSE37269	St0, WT, control	St0, WT, TEV 21 d	-3.33	7.08E-07
GSE37269	Wt1, WT, control	Wt1, WT, TEV 21 d	-1.65	3.87E-02
GSE40544	Col, WT, control	Col, WT, PstDC3000 AvrRpt2	1.90	2.69E-03
GSE40544	Col, Sid2, control	Col, Sid2, PstDC3000 AvrRpt2	2.28	6.27E-04
GSE45212	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 12 h	1.50	6.08E-08
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 12 h	2.32	1.27E-10
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 8 h	1.86	2.83E-09
GSE50526	Col, WT, mock 24 h	Col, WT, A. brassicicola 24 h	2.42	6.86E-05
GSE50526	Col, WT, mock 9 h	Col, WT, A. brassicicola 9 h	4.22	3.14E-08
GSE5520	Col, WT, control 10 h	Col, WT, Cor- hrpS- 10 h	2.00	9.16E-03
GSE5520	Col, WT, control 7 h	Col, WT, E.coli_0157_H7 7 h	1.75	1.33E-02
GSE5520	Col, WT, control 7 h	Col, WT, E.coli_TUV86 flic- 7 h	1.94	3.39E-03
GSE5520	Col, WT, control 7 h	Col, WT, hrpA- 10 h	1.80	7.33E-03
GSE56094	Col, WT, control 10 h	Col, WT, hrpA- 10 h	1.90	2.46E-06
GSE56094	Col, WT, control 11 h	Col, WT, hrpA- 11 h	1.99	7.40E-07
GSE56094	Col, WT, control 12 h	Col, WT, PstDC3000 12 h	2.30	3.89E-09
GSE56094	Col, WT, control 12 h	Col, WT, hrpA- 12 h	1.56	1.92E-04
GSE56094	Col, WT, control 13 h	Col, WT, PstDC3000 13 h	2.06	7.01E-08
GSE56094	Col, WT, control 13 h	Col, WT, hrpA- 13 h	2.14	4.25E-07
GSE56094	Col, WT, control 5 h	Col, WT, hrpA- 5 h	1.60	1.67E-04
GSE56094	Col, WT, control 7 h	Col, WT, hrpA- 7 h	1.91	4.37E-06
GSE56094	Col, WT, control 8 h	Col, WT, hrpA- 8 h	1.53	1.20E-04
GSE56094	Col, WT, control 9 h	Col, WT, PstDC3000 9 h	1.63	2.41E-05
GSE56094	Col, WT, control 9 h	Col, WT, hrpA- 9 h	1.89	3.62E-06
GSE5615	Col, WT, GST 4 h	Col, WT, GST+NPP1 4 h	2.64	4.41E-07
GSE5615	Col, WT, water 4 h	Col, WT, Flg22 4 h	3.03	1.94E-08
GSE5615	Col, WT, water 4 h	Col, WT, HrpZ 4 h	3.45	6.36E-10
GSE5616	Col, WT, water 12 h	Col, WT, P. infestans 12 h	2.93	3.21E-09
GSE5616	Col, WT, water 24 h	Col, WT, P. infestans 24 h	1.69	1.74E-06
GSE5616	Col, WT, water 6 h	Col, WT, P. infestans 6 h	1.56	6.94E-07
GSE6176	Col, WT, control 12 h	Col, WT, PstDC3000 HrpA- 12 h	2.53	1.30E-03
GSE6176	Col, WT, control 12 h	Col, WT, PstDC3000 12 h	1.96	4.41E-03
GSE6556	Col, gh3.5, control	Col, gh3.5, PstDC3000 AvrRpt2 48 h	3.72	1.10E-07