Gene: AT4G19520
     

Gene description


TAIR ID: AT4G19520

Short description: disease resistance protein (TIR-NBS-LRR class) family

Pathogen responsiveness: -0.94

General responsiveness: -3.05

Orthologous


Rice: No orthologous gene
Maize: No orthologous gene
Wheat: No orthologous gene

GO biological process


cellular response to hypoxia, defense response


GO cellular component


nucleus


GO molecular function


unkown


Protein domain


PfamPF01582, TIR domain
PfamPF00931, NB-ARC domain
PfamPF07725, Leucine Rich Repeat
SMARTSM00255, TIR

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT5G61850

Target:
none

Protein-protein interaction network


No Interactor


Differentially expressed condition


9 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE26679Col, edr1, GC 0 hCol, edr1, GC 18 h-1.565.30E-04
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 4 h2.651.67E-13
GSE45214Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 4 h2.857.10E-13
GSE45214Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 4 h1.642.74E-09
GSE45214Col, med16, PstDC3000 AvrRpt2 0 hCol, med16, PstDC3000 AvrRpt2 4 h2.667.33E-13
GSE45214Col, npr1, PstDC3000 AvrRpt2 0 hCol, npr1, PstDC3000 AvrRpt2 4 h2.497.23E-12
GSE4746Col, WT, water 30 minCol, WT, chitooctaose 30 min2.128.58E-03
GSE52979Col, WT, acetoneCol, WT, acetone flg22_2 h2.304.69E-10
GSE52979Col, WT, oxo_C14_HSLCol, WT, oxo_C14_HSL flg22_2 h2.091.28E-09






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