Gene: AT4G16680
     

Gene description


TAIR ID: AT4G16680

Short description: P-loop containing nucleoside triphosphate hydrolases superfamily protein

Pathogen responsiveness: -0.91

General responsiveness: 0.01

Orthologous


Rice: No orthologous gene
Maize: No orthologous gene
Wheat: No orthologous gene

GO biological process


unkown


GO cellular component


nucleus


GO molecular function


RNA helicase activity


Protein domain


PfamPF00270, DEAD/DEAH box helicase
PfamPF00271, Helicase conserved C-terminal domain
SMARTSM00490, HELICc
SMARTSM00487, DEXDc

Metabolic pathway


Not involved in metabolic pathway


Transcriptional regulation


Regulator:
AT1G62300, AT4G31550

Target:
none

Protein-protein interaction network


No Interactor


Coexpression network


No coexpression gene


Differentially expressed condition


7 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE26679Col, WT, GC 0 hCol, WT, GC 18 h1.855.40E-03
GSE26679Col, WT, GC 0 hCol, WT, GC 36 h2.171.34E-03
GSE40544Col, Sid2, controlCol, Sid2, PstDC3000 EV1.932.08E-02
GSE45214Col, med16, PstDC3000 AvrRpt2 0 hCol, med16, PstDC3000 AvrRpt2 4 h1.945.38E-10
GSE5520Col, WT, control 10 hCol, WT, Cor- 10 h2.172.74E-02
GSE5520Col, WT, control 24 hCol, WT, PstDC3000 24 h2.917.79E-03
GSE5520Col, WT, control 7 hCol, WT, PstDC3000 7 h1.802.65E-02






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