Gene: AT4G15975
     

Gene description


TAIR ID: AT4G15975

Short description: RING/U-box superfamily protein

Pathogen responsiveness: 0.72

General responsiveness: -2.46

Orthologous


Rice: No orthologous gene
Maize: No orthologous gene
Wheat: No orthologous gene

GO biological process


protein ubiquitination, response to chitin, defense response


GO cellular component


extracellular region, integral component of membrane


GO molecular function


metal ion binding


Protein domain


PfamPF13639, Ring finger domain
SMARTSM00184, RING

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT5G61850

Target:
none

Protein-protein interaction network


No Interactor


Differentially expressed condition


27 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE12856Col, WT, controlCol, WT, Bg h1.942.31E-06
GSE12856Col, ataf1, controlCol, ataf1, Bg h2.362.65E-07
GSE17382Col, WT, Flg22 0 minCol, WT, Flg22 30 min4.203.05E-02
GSE17382Col, WT, Flg22 0 minCol, WT, Flg22 60min4.302.54E-02
GSE17464Laer, controlLaer, Flg22 1 h2.822.12E-06
GSE17464Penta, controlPenta, Flg22 2 h2.561.19E-05
GSE2169Col, WT, waterCol, WT, chitin 30 min2.468.54E-07
GSE2169Col, rre1, waterCol, rre1, chitin 30 min2.524.56E-07
GSE2169Col, rre2, waterCol, rre2, chitin 30 min2.381.03E-06
GSE2538Col, WT, controlCol, WT, crab shell chitin 30 min3.583.43E-07
GSE2538Col, WT, controlCol, WT, purified chitin octamer 30 min3.356.10E-07
GSE26679Col, WT, GC 0 hCol, WT, GC 36 h-1.704.04E-02
GSE37269Ler0, WT, controlLer0, WT, TEV 21 d2.294.92E-03
GSE40544Col, WT, controlCol, WT, PstDC3000 EV2.361.31E-04
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 4 h1.941.40E-12
GSE45214Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 4 h3.256.16E-07
GSE45214Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 4 h2.012.16E-04
GSE45214Col, med16, PstDC3000 AvrRpt2 0 hCol, med16, PstDC3000 AvrRpt2 4 h2.225.07E-05
GSE45214Col, npr1, PstDC3000 AvrRpt2 0 hCol, npr1, PstDC3000 AvrRpt2 4 h3.721.30E-07
GSE4746Col, WT, water 30 minCol, WT, chitooctaose 30 min3.816.89E-05
GSE50526Col, WT, mock 9 hCol, WT, A. brassicicola 9 h2.901.34E-05
GSE52979Col, WT, acetoneCol, WT, acetone flg22_2 h4.365.79E-09
GSE52979Col, WT, oxo_C14_HSLCol, WT, oxo_C14_HSL flg22_2 h3.753.53E-08
GSE5615Col, WT, water 1 hCol, WT, Flg22 1 h2.154.10E-08
GSE5615Col, WT, water 1 hCol, WT, HrpZ 1 h2.271.18E-08
GSE5616Col, WT, water 6 hCol, WT, P. infestans 6 h2.041.27E-07
GSE8319Col, WT, controlCol, WT, chitooctaose 30 min2.851.83E-14






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