gene detail

Gene description

TAIR ID: AT4G12610

Short description: transcription activators;DNA binding;RNA polymerase II transcription factors;catalytics;transcription initiation factors

Pathogen responsiveness: NA

General responsiveness: NA

Orthologous

Rice: No orthologous gene

Maize:

GRMZM2G014180

Wheat:

TA.9068.1.S1_AT

GO biological process

transcription initiation from RNA polymerase II promoter, positive regulation of transcription elongation from RNA polymerase II promoter

GO cellular component

nucleus, chloroplast

GO molecular function

protein C-terminus binding, DNA binding, protein binding

Protein domain

Pfam	PF05793, Transcription initiation factor IIF, alpha subunit (TFIIF-alpha)

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

PATH:ath03022: Basal transcription factors

Transcriptional regulation

Regulator:
AT5G13790

Target:
none

Protein-protein interaction network

The number of partners (degree) is: 3

click to view PPI network

Coexpression network

GSE56094_WT_HRPA- view
GSE45212_MED14_PSTDC3000_AVRRPT2 view

Differentially expressed condition

1 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE37269	St0, WT, control	St0, WT, TEV 21 d	-1.59	9.85E-03