Gene: AT4G11660
     

Gene description


TAIR ID: AT4G11660

Short description: winged-helix DNA-binding transcription factor family protein

Pathogen responsiveness: -0.69

General responsiveness: 0.51

Orthologous


Rice: No orthologous gene
Maize:

GRMZM2G165272  

Wheat: No orthologous gene

GO biological process


negative regulation of transcription, DNA-templated, response to chitin, transcription


GO cellular component


nucleus


GO molecular function


sequence-specific DNA binding, transcription factor activity


Protein domain


PfamPF00447, HSF-type DNA-binding
SMARTSM00415, HSF

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT4G36990

Target:
none

Protein-protein interaction network


The number of partners (degree) is: 9 (Top20%)

click to view PPI network

Differentially expressed condition


15 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE26679Col, WT, GC 0 hCol, WT, GC 96 h2.102.23E-08
GSE26679Col, edr1, GC 0 hCol, edr1, GC 96 h2.093.16E-08
GSE37269St0, WT, controlSt0, WT, TEV 21 d-1.681.45E-02
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 4 h2.014.24E-16
GSE45214Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 4 h2.378.51E-12
GSE45214Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 4 h1.681.69E-09
GSE45214Col, med16, PstDC3000 AvrRpt2 0 hCol, med16, PstDC3000 AvrRpt2 4 h2.685.25E-13
GSE45214Col, npr1, PstDC3000 AvrRpt2 0 hCol, npr1, PstDC3000 AvrRpt2 4 h2.041.19E-10
GSE58954Col, WT, Psm AvrRpt2 0 hCol, WT, Psm AvrRpt2 6 h2.024.61E-04
GSE9674Ws-4, AtMYB30 ox, controlWs-4, AtMYB30 ox, Xanthomonas strain Xcc147 2-4 h1.847.96E-03
GSE9674Ws-4, AtMYB30 ox, controlWs-4, AtMYB30 ox, Xanthomonas strain Xcc147 6 h2.136.91E-03
GSE9674Ws-4, AtMYB30 ox, controlWs-4, AtMYB30 ox, Xanthomonas strain Xcc147 90-105 min1.841.48E-02
GSE9674Ws-4, WT, controlWs-4, WT, Xanthomonas strain Xcc147 2-4 h2.114.77E-03
GSE9674Ws-4, WT, controlWs-4, WT, Xanthomonas strain Xcc147 6 h2.069.68E-03
GSE9674Ws-4, WT, controlWs-4, WT, Xanthomonas strain Xcc147 90-105 min2.191.61E-03






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