gene detail

Gene description

TAIR ID: AT4G11080

Short description: HMG (high mobility group) box protein

Pathogen responsiveness: -2.56

General responsiveness: -0.72

Orthologous

Rice: No orthologous gene

Maize: No orthologous gene

Wheat: No orthologous gene

GO biological process

regulation of transcription, DNA-templated

GO cellular component

nucleus

GO molecular function

transcription factor activity, sequence-specific DNA binding, DNA binding

Protein domain

Pfam	PF00505, HMG (high mobility group) box
SMART	SM00398, HMG

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

Regulator:
AT2G38250, AT4G16110

Target:
none

Protein-protein interaction network

No Interactor

Coexpression network

GSE56094_WT_HRPA- view
GSE56094_WT_PSTDC3000 view

Differentially expressed condition

3 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE16472	Col, WT, Flg22 0 min	Col, WT, Flg22 60min	1.81	3.11E-02
GSE5615	Col, WT, GST 4 h	Col, WT, GST+NPP1 4 h	1.84	3.37E-07
GSE58954	Col, WT, Psm AvrRpt2 0 h	Col, WT, Psm AvrRpt2 6 h	1.53	1.03E-02