gene detail

Gene description

TAIR ID: AT4G08180

Short description: OSBP(oxysterol binding protein)-related protein 1C

Pathogen responsiveness: -0.53

General responsiveness: -1.53

Orthologous

Rice: No orthologous gene

Maize:

GRMZM2G147332

Wheat:

TA.2640.1.A1_AT

GO biological process

signal transduction, lipid transport, steroid metabolic process

GO cellular component

nucleus

GO molecular function

lipid binding

Protein domain

Pfam	PF01237, Oxysterol-binding protein
Pfam	PF15413, Pleckstrin homology domain
SMART	SM00233, PH

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

Regulator:
AT5G49450

Target:
none

Protein-protein interaction network

No Interactor

Coexpression network

GSE45212_WT_PSTDC3000_AVRRPT2  view
GSE56094_WT_HRPA-  view
GSE13739_WT_GO  view
GSE13739_EDS16_GO  view
GSE5686_WT_GO  view
GSE56094_WT_PSTDC3000  view
GSE45212_MED14_PSTDC3000_AVRRPT2  view

Differentially expressed condition

12 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE12856	Col, WT, control	Col, WT, Bg h	1.62	5.47E-08
GSE17464	Laer, control	Laer, Flg22 2 h	1.79	8.31E-06
GSE17464	Penta, control	Penta, Flg22 2 h	1.56	5.73E-05
GSE17500	Col, WT, control 0 h	Col, WT, PstDC3000 24 h	1.68	1.42E-05
GSE18978	Col, WT, control 24 h	Col, WT, PsmES4326 24 h	2.02	8.48E-07
GSE37269	Ei2, WT, control	Ei2, WT, TEV 21 d	-1.60	1.71E-02
GSE37269	Wt1, WT, control	Wt1, WT, TEV 21 d	-1.56	4.81E-02
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 4 h	1.60	1.77E-11
GSE45214	Col, med16, PstDC3000 AvrRpt2 0 h	Col, med16, PstDC3000 AvrRpt2 4 h	1.57	2.90E-11
GSE56094	Col, WT, control 13 h	Col, WT, PstDC3000 13 h	1.63	1.24E-15
GSE5615	Col, WT, water 4 h	Col, WT, HrpZ 4 h	1.71	2.04E-07
GSE58954	Col, WT, Psm AvrRpt2 0 h	Col, WT, Psm AvrRpt2 6 h	1.55	1.96E-03