gene detail

Gene description

TAIR ID: AT4G05100

Short description: myb domain protein 74

Pathogen responsiveness: -0.21

General responsiveness: 0.40

Orthologous

Rice: No orthologous gene

Maize: No orthologous gene

Wheat: No orthologous gene

GO biological process

regulation of transcription from RNA polymerase II promoter, regulation of transcription, DNA-templated, cell differentiation, response to abscisic acid, response to salt stress, transcription, response to jasmonic acid, response to ethylene

GO cellular component

nucleus

GO molecular function

sequence-specific DNA binding, transcription regulatory region DNA binding, RNA polymerase II transcription factor activity, transcription factor activity, RNA polymerase II transcription factor recruiting

Protein domain

Pfam	PF00249, Myb-like DNA-binding domain
SMART	SM00717, SANT

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

Regulator:
AT5G11260, AT4G28110, AT5G61850

Target:
none

Protein-protein interaction network

The number of partners (degree) is: 12 (Top20%)

click to view PPI network

Coexpression network

GSE45212_WT_PSTDC3000_AVRRPT2  view
GSE56094_WT_HRPA-  view
GSE56094_WT_PSTDC3000  view
GSE45212_MED14_PSTDC3000_AVRRPT2  view

Differentially expressed condition

13 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE18978	Col, WT, control 24 h	Col, WT, PsmES4326 24 h	2.81	2.70E-07
GSE45212	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 12 h	2.75	1.85E-12
GSE45212	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 4 h	3.34	7.47E-13
GSE45212	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 8 h	3.03	7.17E-13
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 12 h	1.69	2.55E-09
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 4 h	1.51	1.36E-08
GSE45214	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 4 h	3.33	2.94E-09
GSE45214	Col, med16, PstDC3000 AvrRpt2 0 h	Col, med16, PstDC3000 AvrRpt2 4 h	2.46	1.20E-07
GSE5520	Col, WT, control 10 h	Col, WT, Cor- 10 h	2.24	7.01E-04
GSE5520	Col, WT, control 24 h	Col, WT, PstDC3000 24 h	1.93	6.68E-03
GSE5520	Col, WT, control 7 h	Col, WT, PstDC3000 7 h	2.45	2.57E-05
GSE58954	Col, WT, Psm AvrRpt2 0 h	Col, WT, Psm AvrRpt2 6 h	2.11	3.75E-02
GSE6176	Col, WT, control 12 h	Col, WT, PstDC3000 12 h	1.99	1.34E-02