Gene: AT4G02840
     


Gene description


TAIR ID: AT4G02840

Short description: Small nuclear ribonucleoprotein family protein

Pathogen responsiveness: -3.45

General responsiveness: -1.83

Orthologous


Rice: No orthologous gene
Maize:

GRMZM2G416061   GRMZM2G027571  

Wheat: No orthologous gene

GO biological process


RNA splicing, posttranscriptional gene silencing by RNA, spliceosomal snRNP assembly, spliceosomal complex assembly, regulation of RNA splicing


GO cellular component


U5 snRNP, vacuolar membrane, nucleolus, nucleus, catalytic step 2 spliceosome, U4 snRNP, U1 snRNP, spliceosomal tri-snRNP complex, SMN-Sm protein complex, U12-type spliceosomal complex, nuclear speck, precatalytic spliceosome, pICln-Sm protein complex, prespliceosome, commitment complex, small nucleolar ribonucleoprotein complex, membrane, U2 snRNP, intracellular ribonucleoprotein complex


GO molecular function


RNA binding, mRNA binding


Protein domain


PfamPF01423, LSM domain
SMARTSM00651, Sm

Metabolic pathway


Not involved in metabolic pathway


Transcriptional regulation


No regulation information

Protein-protein interaction network


The number of partners (degree) is: 2

click to view PPI network

Differentially expressed condition


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