Gene: AT4G01010
     

Gene description


TAIR ID: AT4G01010

Short description: cyclic nucleotide-gated channel 13

Pathogen responsiveness: 1.02

General responsiveness: -1.89

Orthologous


Rice: No orthologous gene
Maize: No orthologous gene
Wheat: No orthologous gene

GO biological process


regulation of membrane potential


GO cellular component


integral component of plasma membrane, plasma membrane


GO molecular function


calmodulin binding, cAMP binding, cGMP binding, voltage-gated potassium channel activity, ion channel activity


Protein domain


PfamPF00520, Ion transport protein
PfamPF00027, Cyclic nucleotide-binding domain
SMARTSM00100, cNMP

Metabolic pathway


Not involved in metabolic pathway


Transcriptional regulation


Regulator:
AT5G61850, AT4G36990

Target:
none

Protein-protein interaction network


The number of partners (degree) is: 38 (Top5%)

click to view PPI network

Differentially expressed condition


44 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE11807Col, ERF104 ox, water 4 hCol, ERF104 ox, Flg22 4 h1.561.27E-02
GSE12856Col, WT, controlCol, WT, Bg h2.191.82E-08
GSE12856Col, ataf1, controlCol, ataf1, Bg h2.761.80E-09
GSE17382Col, WT, Flg22 0 minCol, WT, Flg22 30 min2.504.87E-02
GSE17464Laer, JA+Flg22 0 hLaer, JA+Flg22 1 h1.781.28E-03
GSE17464Laer, controlLaer, Flg22 1 h2.536.60E-07
GSE17464Laer, controlLaer, Flg22 2 h2.006.40E-05
GSE17464Penta, controlPenta, Flg22 2 h2.323.62E-06
GSE17464Penta, controlPenta, Flg22 2 h1.871.36E-04
GSE17500Col, 35S:AFB1, control 0 hCol, 35S:AFB1, PstDC3000 24 h1.813.62E-05
GSE17500Col, WT, control 0 hCol, WT, PstDC3000 24 h2.352.03E-06
GSE17500Col, miR393, control 0 hCol, miR393, PstDC3000 24 h2.041.21E-05
GSE18978Col, WT, control 24 hCol, WT, PsmES4326 24 h2.872.69E-08
GSE21920Col, WT, mockCol, WT, Pto HopZ1a 6 h1.651.42E-06
GSE2538Col, WT, controlCol, WT, crab shell chitin 30 min1.922.12E-05
GSE2538Col, WT, controlCol, WT, purified chitin octamer 30 min1.647.19E-05
GSE26679Col, edr1, GC 0 hCol, edr1, GC 36 h1.554.46E-08
GSE40544Col, WT, controlCol, WT, PstDC3000 AvrRpt22.201.26E-06
GSE40544Col, WT, controlCol, WT, PstDC3000 EV2.295.91E-07
GSE40544Col, Sid2, controlCol, Sid2, PstDC3000 AvrRpt22.269.80E-07
GSE40544Col, Sid2, controlCol, Sid2, PstDC3000 EV1.591.00E-04
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 12 h2.672.98E-14
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 4 h2.514.33E-13
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 8 h2.723.68E-14
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 12 h2.968.74E-15
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 4 h3.627.14E-16
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 8 h2.653.10E-14
GSE45214Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 4 h3.494.09E-11
GSE45214Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 4 h2.897.96E-10
GSE45214Col, med16, PstDC3000 AvrRpt2 0 hCol, med16, PstDC3000 AvrRpt2 4 h3.687.85E-12
GSE45214Col, npr1, PstDC3000 AvrRpt2 0 hCol, npr1, PstDC3000 AvrRpt2 4 h3.584.33E-11
GSE4746Col, WT, water 30 minCol, WT, chitooctaose 30 min1.541.84E-04
GSE50526Col, WT, mock 9 hCol, WT, A. brassicicola 9 h2.741.39E-02
GSE52979Col, WT, acetoneCol, WT, acetone flg22_24 h1.521.83E-05
GSE52979Col, WT, acetoneCol, WT, acetone flg22_2 h2.861.45E-09
GSE52979Col, WT, oxo_C14_HSLCol, WT, oxo_C14_HSL flg22_2 h2.841.40E-09
GSE5520Col, WT, control 10 hCol, WT, Cor- 10 h1.875.29E-03
GSE56094Col, WT, control 13 hCol, WT, PstDC3000 13 h1.577.29E-06
GSE5615Col, WT, water 1 hCol, WT, HrpZ 1 h1.663.12E-06
GSE5615Col, WT, water 4 hCol, WT, HrpZ 4 h1.961.68E-08
GSE58954Col, WT, Psm AvrRpt2 0 hCol, WT, Psm AvrRpt2 6 h1.699.47E-03
GSE8319Col, WT, controlCol, WT, chitooctaose 30 min1.911.87E-13
GSE9674Ws-4, AtMYB30 ox, controlWs-4, AtMYB30 ox, Xanthomonas strain Xcc147 6 h2.045.98E-04
GSE9674Ws-4, WT, controlWs-4, WT, Xanthomonas strain Xcc147 6 h1.682.41E-03






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