gene detail

Gene description

TAIR ID: AT3G60180

Short description: P-loop containing nucleoside triphosphate hydrolases superfamily protein

Pathogen responsiveness: NA

General responsiveness: -2.75

Orthologous

Rice: No orthologous gene

Maize: No orthologous gene

Wheat: No orthologous gene

GO biological process

'de novo' pyrimidine nucleobase biosynthetic process, pyrimidine nucleotide biosynthetic process

GO cellular component

cytoplasm, nucleus

GO molecular function

uridylate kinase activity, ATP binding, cytidylate kinase activity

Protein domain

Pfam	PF00406, Adenylate kinase

Metabolic pathway

PWY-7208: superpathway of pyrimidine nucleobases salvage
PWY0-162: superpathway of pyrimidine ribonucleotides de novo biosynthesis
PWY-7196: superpathway of pyrimidine ribonucleosides salvage
PWY-7200: superpathway of pyrimidine deoxyribonucleoside salvage
PWY-7176: UTP and CTP de novo biosynthesis
PWY-7211: superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis
PWY-7197: pyrimidine deoxyribonucleotide phosphorylation
PWY-7205: CMP phosphorylation
PWY0-163: salvage pathways of pyrimidine ribonucleotides

KEGG pathway

PATH:ath00240: Pyrimidine metabolism

Transcriptional regulation

Regulator:
AT1G62300

Target:
none

Protein-protein interaction network

No Interactor

Coexpression network

GSE45212_WT_PSTDC3000_AVRRPT2  view
GSE26679_WT_GC  view
GSE26679_EDR1_GC  view

Differentially expressed condition

5 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE17500	Col, WT, control 0 h	Col, WT, PstDC3000 24 h	2.35	2.40E-06
GSE17500	Col, miR393, control 0 h	Col, miR393, PstDC3000 24 h	1.68	6.07E-05
GSE26679	Col, edr1, GC 0 h	Col, edr1, GC 18 h	1.52	5.27E-07
GSE26679	Col, edr1, GC 0 h	Col, edr1, GC 36 h	1.89	8.71E-09
GSE40544	Col, WT, control	Col, WT, PstDC3000 EV	1.64	2.83E-05