gene detail

Gene description

TAIR ID: AT3G58610

Short description: ketol-acid reductoisomerase

Pathogen responsiveness: -1.81

General responsiveness: -2.61

Orthologous

Rice:

OS01G0652600

Maize:

GRMZM2G004382

Wheat: No orthologous gene

GO biological process

valine biosynthetic process, oxidation-reduction process, branched-chain amino acid biosynthetic process, isoleucine biosynthetic process, response to cadmium ion

GO cellular component

chloroplast stroma, plastid, chloroplast, apoplast, cell wall, chloroplast envelope, mitochondrion

GO molecular function

ketol-acid reductoisomerase activity

Protein domain

Pfam	PF07991, Acetohydroxy acid isomeroreductase, NADPH-binding domain
Pfam	PF01450, Acetohydroxy acid isomeroreductase, catalytic domain

Metabolic pathway

PWY-3001: isoleucine biosynthesis I
ILE-VAL-PWY: superpathway of isoleucine and valine biosynthesis
BRANCHED-CHAIN-AA-SYN-PWY: superpathway of leucine, valine, and isoleucine biosynthesis
ILEUSYN-PWY: isoleucine biosynthesis I (from threonine)
VALSYN-PWY: valine biosynthesis

KEGG pathway

PATH:ath01210: 2-Oxocarboxylic acid metabolism
PATH:ath01230: Biosynthesis of amino acids
PATH:ath00290: Valine, leucine and isoleucine biosynthesis
PATH:ath00770: Pantothenate and CoA biosynthesis

Transcriptional regulation

Regulator:
AT5G13790

Target:
none

Protein-protein interaction network

The number of partners (degree) is: 2

click to view PPI network

Coexpression network

GSE45212_WT_PSTDC3000_AVRRPT2  view
GSE56094_WT_HRPA-  view
GSE13739_EDS16_GO  view
GSE56094_WT_PSTDC3000  view
GSE45212_MED14_PSTDC3000_AVRRPT2  view

Differentially expressed condition

2 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE18978	Col, WT, control 24 h	Col, WT, PsmES4326 24 h	-2.39	3.48E-11
GSE45212	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 8 h	-1.55	1.45E-09