Gene: AT3G57300
     

Gene description


TAIR ID: AT3G57300

Short description: INO80 ortholog

Pathogen responsiveness: -2.20

General responsiveness: -2.75

Orthologous


Rice: No orthologous gene
Maize:

GRMZM2G469162  

Wheat:

TA.4945.1.S1_AT  


GO biological process


regulation of transcription, DNA-templated, DNA repair, positive regulation of DNA repair, vegetative to reproductive phase transition of meristem, transcription, positive regulation of double-strand break repair via homologous recombination, chromatin remodeling, covalent chromatin modification, somatic cell DNA recombination


GO cellular component


nucleus, Ino80 complex


GO molecular function


ATP binding, helicase activity, DNA binding, ATPase activity


Protein domain


PfamPF00271, Helicase conserved C-terminal domain
PfamPF00176, SNF2 family N-terminal domain
PfamPF13892, DNA-binding domain
SMARTSM00487, DEXDc
SMARTSM00490, HELICc

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT4G36990

Target:
none

Protein-protein interaction network


The number of partners (degree) is: 2

click to view PPI network

Differentially expressed condition


3 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE26679Col, WT, GC 0 hCol, WT, GC 18 h1.522.78E-08
GSE26679Col, edr1, GC 0 hCol, edr1, GC 18 h1.752.10E-09
GSE26679Col, edr1, GC 0 hCol, edr1, GC 36 h1.682.52E-09






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