gene detail

Gene description

TAIR ID: AT3G55460

Short description: SC35-like splicing factor 30

Pathogen responsiveness: -3.05

General responsiveness: -3.38

Orthologous

Rice:

Maize: No orthologous gene

Wheat: No orthologous gene

GO biological process

RNA splicing, response to oxidative stress, mRNA splicing, via spliceosome

GO cellular component

spliceosomal complex, nuclear speck, nucleus

GO molecular function

protein binding, identical protein binding

Protein domain

Pfam	PF00076, RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
SMART	SM00360, RRM

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

PATH:ath03040: Spliceosome

Transcriptional regulation

Regulator:
AT5G13790, AT4G36990

Target:
none

Protein-protein interaction network

The number of partners (degree) is: 23 (Top10%)

Coexpression network

Differentially expressed condition