Gene: AT3G53790
     

Gene description


TAIR ID: AT3G53790

Short description: TRF-like 4

Pathogen responsiveness: -1.82

General responsiveness: -4.14

Orthologous


Rice: No orthologous gene
Maize: No orthologous gene
Wheat: No orthologous gene

GO biological process


regulation of transcription, DNA-templated, telomeric loop formation, transcription


GO cellular component


nuclear telomere cap complex, nucleus


GO molecular function


double-stranded telomeric DNA binding


Protein domain


PfamPF00249, Myb-like DNA-binding domain
SMARTSM00717, SANT

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT5G61850

Target:
none

Protein-protein interaction network


The number of partners (degree) is: 2

click to view PPI network

Coexpression network


No coexpression gene


Differentially expressed condition


4 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE26679Col, WT, GC 0 hCol, WT, GC 96 h-2.602.56E-02
GSE37269Di2, WT, controlDi2, WT, TEV 21 d-2.924.66E-03
GSE37269Wt1, WT, controlWt1, WT, TEV 21 d-2.707.60E-03
GSE40544Col, Sid2, controlCol, Sid2, PstDC3000 EV1.934.75E-03






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