gene detail

Gene description

TAIR ID: AT3G53760

Short description: GAMMA-TUBULIN COMPLEX PROTEIN 4

Pathogen responsiveness: -2.15

General responsiveness: -3.01

Orthologous

Rice: No orthologous gene

Maize:

GRMZM2G008093

Wheat: No orthologous gene

GO biological process

response to nematode, growth, microtubule nucleation, interphase microtubule nucleation by interphase microtubule organizing center, meiotic cell cycle, mitotic spindle assembly, cortical microtubule organization

GO cellular component

plasmodesma, spindle, gamma-tubulin complex, microtubule organizing center, spindle pole, cytoplasm, microtubule, equatorial microtubule organizing center, mitochondrion

GO molecular function

gamma-tubulin binding, structural constituent of cytoskeleton, microtubule minus-end binding

Protein domain

Pfam	PF04130, Spc97 / Spc98 family

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

Regulator:
AT5G07100, AT5G22570, AT2G46130

Target:
none

Protein-protein interaction network

The number of partners (degree) is: 3

click to view PPI network

Coexpression network

GSE26679_WT_GC  view
GSE56094_WT_HRPA-  view
GSE13739_EDS16_GO  view
GSE45212_MED14_PSTDC3000_AVRRPT2  view

Differentially expressed condition

4 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE26679	Col, WT, GC 0 h	Col, WT, GC 18 h	1.85	3.34E-07
GSE26679	Col, WT, GC 0 h	Col, WT, GC 36 h	1.72	8.85E-07
GSE26679	Col, edr1, GC 0 h	Col, edr1, GC 18 h	1.62	2.21E-06
GSE26679	Col, edr1, GC 0 h	Col, edr1, GC 36 h	1.51	4.05E-06