Gene: AT3G53500
     

Gene description


TAIR ID: AT3G53500

Short description: RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain

Pathogen responsiveness: -3.54

General responsiveness: -2.72

Orthologous


Rice: No orthologous gene
Maize: No orthologous gene
Wheat: No orthologous gene

GO biological process


RNA splicing, mRNA splicing, via spliceosome


GO cellular component


spliceosomal complex, nucleus


GO molecular function


zinc ion binding, nucleic acid binding


Protein domain


PfamPF00076, RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
PfamPF00098, Zinc knuckle
SMARTSM00343, ZnF_C2HC
SMARTSM00360, RRM

Metabolic pathway


Not involved in metabolic pathway


Transcriptional regulation


Regulator:
AT5G07100, AT5G13790, AT5G22570, AT2G46130

Target:
none

Protein-protein interaction network


The number of partners (degree) is: 1

click to view PPI network

Differentially expressed condition


Copyright © 2017 Ziding Zhang's Lab - China Agricultural University. All Rights Reserved.