gene detail

Gene description

TAIR ID: AT3G49130

Short description: SWAP (Suppressor-of-White-APricot)/surp RNA-binding domain-containing protein

Pathogen responsiveness: 0.36

General responsiveness: -0.93

Orthologous

Rice: No orthologous gene

Maize: No orthologous gene

Wheat: No orthologous gene

GO biological process

unkown

GO cellular component

nucleus

GO molecular function

unkown

Protein domain

Pfam	PF01805, Surp module
SMART	SM00648, SWAP

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

Regulator:
AT3G27920

Target:
none

Protein-protein interaction network

No Interactor

Coexpression network

GSE56094_WT_HRPA-  view
GSE13739_EDS16_GO  view
GSE56094_WT_PSTDC3000  view
GSE45212_MED14_PSTDC3000_AVRRPT2  view

Differentially expressed condition

28 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE17464	Laer, JA+Flg22 0 h	Laer, JA+Flg22 2 h	1.51	1.06E-02
GSE17464	Laer, control	Laer, Flg22 1 h	1.95	4.12E-04
GSE17464	Laer, control	Laer, Flg22 2 h	1.75	1.35E-03
GSE17464	Penta, control	Penta, Flg22 2 h	1.63	3.04E-03
GSE18978	Col, WT, control 24 h	Col, WT, PsmES4326 24 h	1.67	1.04E-05
GSE26679	Col, WT, GC 0 h	Col, WT, GC 18 h	-2.01	1.30E-02
GSE26679	Col, WT, GC 0 h	Col, WT, GC 36 h	-1.69	3.51E-02
GSE37269	Di2, WT, control	Di2, WT, TEV 21 d	3.00	3.42E-04
GSE37269	Ler0, WT, control	Ler0, WT, TEV 21 d	3.31	8.12E-06
GSE40544	Col, WT, control	Col, WT, PstDC3000 AvrRpt2	2.45	5.46E-03
GSE40544	Col, Sid2, control	Col, Sid2, PstDC3000 AvrRpt2	2.16	1.29E-02
GSE52979	Col, WT, acetone	Col, WT, acetone flg22_24 h	1.80	5.25E-03
GSE52979	Col, WT, oxo_C14_HSL	Col, WT, oxo_C14_HSL flg22_24 h	2.08	1.60E-03
GSE52979	Col, WT, oxo_C14_HSL	Col, WT, oxo_C14_HSL flg22_2 h	2.27	3.30E-04
GSE56094	Col, WT, control 10 h	Col, WT, PstDC3000 10 h	3.28	4.57E-08
GSE56094	Col, WT, control 10 h	Col, WT, hrpA- 10 h	2.46	9.53E-05
GSE56094	Col, WT, control 11 h	Col, WT, PstDC3000 11 h	2.67	8.96E-06
GSE56094	Col, WT, control 11 h	Col, WT, hrpA- 11 h	2.86	5.11E-06
GSE56094	Col, WT, control 12 h	Col, WT, PstDC3000 12 h	2.80	3.26E-06
GSE56094	Col, WT, control 12 h	Col, WT, hrpA- 12 h	1.95	3.15E-03
GSE56094	Col, WT, control 13 h	Col, WT, PstDC3000 13 h	3.43	1.44E-08
GSE56094	Col, WT, control 13 h	Col, WT, hrpA- 13 h	1.77	8.03E-03
GSE56094	Col, WT, control 3 h	Col, WT, hrpA- 3 h	1.65	1.71E-02
GSE56094	Col, WT, control 6 h	Col, WT, PstDC3000 6 h	1.53	2.06E-02
GSE56094	Col, WT, control 7 h	Col, WT, hrpA- 7 h	2.36	2.83E-04
GSE56094	Col, WT, control 8 h	Col, WT, hrpA- 8 h	1.86	3.36E-03
GSE56094	Col, WT, control 9 h	Col, WT, PstDC3000 9 h	1.80	3.32E-03
GSE56094	Col, WT, control 9 h	Col, WT, hrpA- 9 h	2.31	2.96E-04