gene detail

Gene description

TAIR ID: AT3G48950

Short description: Pectin lyase-like superfamily protein

Pathogen responsiveness: -2.01

General responsiveness: -4.65

Orthologous

Rice: No orthologous gene

Maize:

Wheat:

GO biological process

cell wall organization, carbohydrate metabolic process

GO cellular component

extracellular region

GO molecular function

lyase activity, polygalacturonase activity

Protein domain

Pfam	PF00295, Glycosyl hydrolases family 28
SMART	SM00710, PbH1

Metabolic pathway

PWY-1081: homogalacturonan degradation

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

Regulator:
AT5G61850

Target:
none

Protein-protein interaction network

The number of partners (degree) is: 1

Coexpression network

No coexpression gene

Differentially expressed condition

2 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE37269	St0, WT, control	St0, WT, TEV 21 d	-4.22	3.27E-07
GSE52979	Col, WT, oxo_C14_HSL	Col, WT, oxo_C14_HSL flg22_2 h	1.95	3.60E-02