Gene: AT3G48430
     


Gene description


TAIR ID: AT3G48430

Short description: relative of early flowering 6

Pathogen responsiveness: NA

General responsiveness: NA

Orthologous


Rice:

OS01G0907400  

Maize:

GRMZM2G321810  

Wheat: No orthologous gene

GO biological process


histone H3-K9 demethylation, negative regulation of histone acetylation, transcription, DNA-templated, oxidation-reduction process, regulation of transcription, leaf development, unidimensional cell growth, response to brassinosteroid, vegetative to reproductive phase transition of meristem


GO cellular component


nucleus


GO molecular function


protein binding, nucleic acid binding, dioxygenase activity, transcription factor activity, sequence-specific DNA binding, metal ion binding


Protein domain


PfamPF02375, jmjN domain
PfamPF02373, JmjC domain, hydroxylase
SMARTSM00558, JmjC
SMARTSM00355, ZnF_C2H2
SMARTSM00545, JmjN

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
none

Target:
AT5G10140, AT5G57560

Protein-protein interaction network


The number of partners (degree) is: 4

click to view PPI network

Differentially expressed condition


1 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE37269St0, WT, controlSt0, WT, TEV 21 d-1.501.76E-02






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