gene detail

Gene description

TAIR ID: AT3G48100

Short description: response regulator 5

Pathogen responsiveness: -0.96

General responsiveness: 0.46

Orthologous

Rice: No orthologous gene

Maize: No orthologous gene

Wheat: No orthologous gene

GO biological process

cytokinin-activated signaling pathway, regulation of transcription, DNA-templated, response to cytokinin, response to red light, transcription, circadian rhythm, phosphorelay signal transduction system

GO cellular component

cytoplasm, nucleus

GO molecular function

phosphorelay response regulator activity, protein binding

Protein domain

Pfam	PF00072, Response regulator receiver domain
SMART	SM00448, REC

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

PATH:ath04075: Plant hormone signal transduction

Transcriptional regulation

Regulator:
AT2G17950, AT1G62360

Target:
none

Protein-protein interaction network

The number of partners (degree) is: 24 (Top10%)

click to view PPI network

Coexpression network

GSE5686_WT_GO view

Differentially expressed condition

7 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE17464	Laer, control	Laer, Alternaria brassicicola 3 d	2.23	3.75E-06
GSE17464	Laer, control	Laer, PstDC3000 12 h	2.18	6.74E-06
GSE17464	Laer, control	Laer, Flg22 1 h	1.77	1.79E-04
GSE17464	Penta, control	Penta, PstDC3000 12 h	2.43	5.11E-07
GSE17464	Penta, control	Penta, Flg22 2 h	2.13	8.95E-06
GSE26206	Col, WT, control	Col, WT, R.solani_AG8 7 d	-2.05	2.95E-06
GSE50526	Col, WT, mock 24 h	Col, WT, A. brassicicola 24 h	-1.63	3.29E-02