gene detail

Gene description

TAIR ID: AT3G48010

Short description: cyclic nucleotide-gated channel 16

Pathogen responsiveness: -1.82

General responsiveness: -5.97

Orthologous

Rice: No orthologous gene

Maize: No orthologous gene

Wheat: No orthologous gene

GO biological process

regulation of membrane potential

GO cellular component

integral component of plasma membrane, plasma membrane

GO molecular function

cAMP binding, cGMP binding, calmodulin binding, voltage-gated potassium channel activity, ion channel activity

Protein domain

Pfam	PF00520, Ion transport protein
Pfam	PF00027, Cyclic nucleotide-binding domain
SMART	SM00100, cNMP

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

PATH:ath04626: Plant-pathogen interaction

Transcriptional regulation

Regulator:
AT3G16857, AT4G16110

Target:
none

Protein-protein interaction network

The number of partners (degree) is: 1

Coexpression network

No coexpression gene

Differentially expressed condition

4 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE37269	St0, WT, control	St0, WT, TEV 21 d	-1.95	1.19E-02
GSE37269	Wt1, WT, control	Wt1, WT, TEV 21 d	-2.11	2.68E-02
GSE52979	Col, WT, acetone	Col, WT, acetone flg22_2 h	-3.21	1.70E-03
GSE52979	Col, WT, oxo_C14_HSL	Col, WT, oxo_C14_HSL flg22_2 h	-4.46	6.69E-05