Gene: AT3G47780
Gene description
TAIR ID: AT3G47780
Short description: ABC2 homolog 6
Pathogen responsiveness: 0.91
General responsiveness: 1.40
GO biological process
lipid transport
GO cellular component
integral component of membrane, plasma membrane, plasmodesma, intracellular membrane-bounded organelle
GO molecular function
ATPase activity, coupled to transmembrane movement of substances, transporter activity, ATP binding
Protein domain
| Pfam | PF00005, ABC transporter |
| Pfam | PF12698, ABC-2 family transporter protein |
| SMART | SM00382, AAA |
Metabolic pathway
Not involved in metabolic pathway
KEGG pathway
Not involved in KEGG pathway
Protein-protein interaction network
The number of partners (degree) is: 17 (Top10%)
click to view PPI networkCoexpression network
Differentially expressed condition 
34 conditions
| Series | Control | Treatment | Log2FC | Adj. P value |
|---|---|---|---|---|
| GSE12856 | Col, ataf1, control | Col, ataf1, Bg h | 1.56 | 8.26E-06 |
| GSE17464 | Laer, control | Laer, Alternaria brassicicola 3 d | -1.67 | 3.92E-05 |
| GSE17464 | Laer, control | Laer, Flg22 1 h | 1.88 | 4.53E-06 |
| GSE17464 | Laer, control | Laer, Flg22 2 h | 1.78 | 2.11E-05 |
| GSE17464 | Penta, control | Penta, Alternaria brassicicola 3 d | -1.90 | 3.24E-06 |
| GSE17500 | Col, 35S:AFB1, control 0 h | Col, 35S:AFB1, PstDC3000 24 h | 1.94 | 4.01E-04 |
| GSE17500 | Col, WT, control 0 h | Col, WT, PstDC3000 24 h | 2.51 | 2.92E-05 |
| GSE17500 | Col, miR393, control 0 h | Col, miR393, PstDC3000 24 h | 2.32 | 8.37E-05 |
| GSE18329 | Col, wrky72_1, control | Col, wrky72_1, Hpa noco2 96 h | 1.55 | 5.15E-07 |
| GSE18329 | Col, wrky72_1, control | Col, wrky72_2, Hpa noco2 96 h | 1.57 | 4.71E-07 |
| GSE18978 | Col, WT, control 24 h | Col, WT, PsmES4326 24 h | 3.46 | 1.71E-08 |
| GSE20278 | Col, RPL18-HF, control, polysomal RNA | Col, RPL18-HF, TuMV 10 d, polysomal RNA | 1.63 | 8.07E-04 |
| GSE21920 | Col, WT, mock | Col, WT, Pto HopZ1a 6 h | 1.69 | 2.68E-08 |
| GSE40544 | Col, WT, control | Col, WT, PstDC3000 AvrRpt2 | 2.72 | 2.86E-06 |
| GSE40544 | Col, WT, control | Col, WT, PstDC3000 EV | 2.01 | 5.16E-05 |
| GSE40544 | Col, Sid2, control | Col, Sid2, PstDC3000 AvrRpt2 | 2.49 | 7.18E-06 |
| GSE45212 | Col, WT, PstDC3000 AvrRpt2 0 h | Col, WT, PstDC3000 AvrRpt2 12 h | 2.74 | 1.48E-12 |
| GSE45212 | Col, WT, PstDC3000 AvrRpt2 0 h | Col, WT, PstDC3000 AvrRpt2 4 h | 2.34 | 6.00E-11 |
| GSE45212 | Col, WT, PstDC3000 AvrRpt2 0 h | Col, WT, PstDC3000 AvrRpt2 8 h | 2.93 | 8.62E-13 |
| GSE45212 | Col, med14, PstDC3000 AvrRpt2 0 h | Col, med14, PstDC3000 AvrRpt2 12 h | 2.89 | 7.79E-13 |
| GSE45212 | Col, med14, PstDC3000 AvrRpt2 0 h | Col, med14, PstDC3000 AvrRpt2 4 h | 3.45 | 8.34E-14 |
| GSE45212 | Col, med14, PstDC3000 AvrRpt2 0 h | Col, med14, PstDC3000 AvrRpt2 8 h | 3.85 | 1.36E-14 |
| GSE45214 | Col, WT, PstDC3000 AvrRpt2 0 h | Col, WT, PstDC3000 AvrRpt2 4 h | 3.37 | 2.72E-14 |
| GSE45214 | Col, med14, PstDC3000 AvrRpt2 0 h | Col, med14, PstDC3000 AvrRpt2 4 h | 3.50 | 4.07E-14 |
| GSE45214 | Col, med16, PstDC3000 AvrRpt2 0 h | Col, med16, PstDC3000 AvrRpt2 4 h | 3.97 | 1.15E-15 |
| GSE45214 | Col, npr1, PstDC3000 AvrRpt2 0 h | Col, npr1, PstDC3000 AvrRpt2 4 h | 3.10 | 1.06E-13 |
| GSE50526 | Col, WT, mock 24 h | Col, WT, A. brassicicola 24 h | 2.83 | 1.03E-02 |
| GSE50526 | Col, WT, mock 9 h | Col, WT, A. brassicicola 9 h | 3.20 | 1.73E-03 |
| GSE5520 | Col, WT, control 10 h | Col, WT, Cor- 10 h | 3.93 | 2.17E-06 |
| GSE58954 | Col, WT, Psm AvrRpt2 0 h | Col, WT, Psm AvrRpt2 6 h | 3.66 | 2.04E-02 |
| GSE62537 | Col, WT, control 48 h | Col, WT, V.longisporum 48 h | 2.34 | 1.10E-02 |
| GSE6556 | Col, gh3.5, control | Col, gh3.5, PstDC3000 AvrRpt2 48 h | 1.63 | 7.37E-06 |
| GSE9674 | Ws-4, AtMYB30 ox, control | Ws-4, AtMYB30 ox, Xanthomonas strain Xcc147 6 h | 2.27 | 4.51E-04 |
| GSE9674 | Ws-4, WT, control | Ws-4, WT, Xanthomonas strain Xcc147 6 h | 2.97 | 8.75E-05 |
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