Gene: AT3G46520
     


Gene description


TAIR ID: AT3G46520

Short description: actin-12

Pathogen responsiveness: -0.72

General responsiveness: -3.94

Orthologous


Rice: No orthologous gene
Maize: No orthologous gene
Wheat:

TA.4344.1.A1_AT  


GO biological process


cytoskeleton organization


GO cellular component


cytoskeleton, chloroplast envelope, chloroplast stroma, cytoplasm, mitochondrion


GO molecular function


ATP binding


Protein domain


PfamPF00022, Actin
SMARTSM00268, ACTIN

KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT5G13790

Target:
none

Protein-protein interaction network


The number of partners (degree) is: 17 (Top10%)

click to view PPI network

Differentially expressed condition


8 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE37269St0, WT, controlSt0, WT, TEV 21 d-3.394.19E-06
GSE37269Wt1, WT, controlWt1, WT, TEV 21 d-1.843.70E-02
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 12 h1.637.70E-10
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 8 h2.161.73E-11
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 4 h1.648.23E-10
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 8 h2.101.82E-11
GSE45214Col, med16, PstDC3000 AvrRpt2 0 hCol, med16, PstDC3000 AvrRpt2 4 h1.672.37E-05
GSE58954Col, WT, Psm AvrRpt2 0 hCol, WT, Psm AvrRpt2 6 h1.787.58E-04






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