gene detail

Gene description

TAIR ID: AT3G44890

Short description: ribosomal protein L9

Pathogen responsiveness: 0.31

General responsiveness: 2.06

Orthologous

Rice:

OS02G0822600 OS05G0528900

Maize:

GRMZM2G096962

Wheat:

TA.14183.1.S1_AT

GO biological process

translation, ribosome biogenesis

GO cellular component

chloroplast stroma, chloroplast, chloroplast envelope, mitochondrion, ribosome

GO molecular function

RNA binding, rRNA binding

Protein domain

Pfam	PF03948, Ribosomal protein L9, C-terminal domain
Pfam	PF01281, Ribosomal protein L9, N-terminal domain

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

PATH:ath03010: Ribosome

Transcriptional regulation

Regulator:
AT3G24050

Target:
none

Protein-protein interaction network

The number of partners (degree) is: 3

click to view PPI network

Coexpression network

GSE45212_WT_PSTDC3000_AVRRPT2  view
GSE26679_WT_GC  view
GSE56094_WT_HRPA-  view
GSE13739_WT_GO  view
GSE13739_EDS16_GO  view
GSE5686_WT_GO  view
GSE56094_WT_PSTDC3000  view

Differentially expressed condition

23 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE17500	Col, 35S:AFB1, control 0 h	Col, 35S:AFB1, PstDC3000 24 h	-2.38	1.80E-04
GSE17500	Col, WT, control 0 h	Col, WT, PstDC3000 24 h	-2.69	3.75E-05
GSE17500	Col, miR393, control 0 h	Col, miR393, PstDC3000 24 h	-2.52	9.66E-05
GSE18978	Col, WT, control 24 h	Col, WT, PsmES4326 24 h	-5.64	1.68E-11
GSE40544	Col, WT, control	Col, WT, PstDC3000 AvrRpt2	-2.24	1.59E-04
GSE40544	Col, WT, control	Col, WT, PstDC3000 EV	-1.79	1.09E-03
GSE40544	Col, Sid2, control	Col, Sid2, PstDC3000 AvrRpt2	-2.27	1.49E-04
GSE45212	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 12 h	-2.77	7.61E-06
GSE45212	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 8 h	-2.21	1.12E-04
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 12 h	-2.75	8.74E-06
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 8 h	-2.02	2.61E-04
GSE50526	Col, WT, mock 24 h	Col, WT, A. brassicicola 24 h	-2.18	1.86E-03
GSE5520	Col, WT, control 10 h	Col, WT, Cor- 10 h	-2.72	3.51E-05
GSE5520	Col, WT, control 7 h	Col, WT, PstDC3000 7 h	-2.05	9.67E-05
GSE56094	Col, WT, control 10 h	Col, WT, PstDC3000 10 h	-2.02	8.41E-09
GSE56094	Col, WT, control 11 h	Col, WT, PstDC3000 11 h	-1.97	2.71E-08
GSE56094	Col, WT, control 11 h	Col, WT, hrpA- 11 h	-1.74	2.11E-06
GSE56094	Col, WT, control 12 h	Col, WT, PstDC3000 12 h	-1.84	1.70E-07
GSE56094	Col, WT, control 12 h	Col, WT, hrpA- 12 h	-1.52	7.69E-05
GSE56094	Col, WT, control 13 h	Col, WT, PstDC3000 13 h	-1.94	3.38E-08
GSE56094	Col, WT, control 9 h	Col, WT, PstDC3000 9 h	-1.69	2.23E-06
GSE56094	Col, WT, control 9 h	Col, WT, hrpA- 9 h	-2.02	1.05E-07
GSE6176	Col, WT, control 12 h	Col, WT, PstDC3000 12 h	-1.69	1.60E-04