gene detail

Gene description

TAIR ID: AT3G27560

Short description: Protein kinase superfamily protein

Pathogen responsiveness: -0.67

General responsiveness: -1.83

Orthologous

Rice: No orthologous gene

Maize: No orthologous gene

Wheat: No orthologous gene

GO biological process

protein phosphorylation, intracellular signal transduction, root epidermal cell differentiation

GO cellular component

mitochondrion, nucleus

GO molecular function

protein serine/threonine/tyrosine kinase activity, protein kinase activity, protein tyrosine kinase activity, ATP binding, protein serine/threonine kinase activity, kinase activity, signal transducer activity

Protein domain

Pfam	PF07714, Protein tyrosine kinase
SMART	SM00220, S_TKc

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

Regulator:
AT3G16857, AT4G16110, AT4G36990

Target:
none

Protein-protein interaction network

The number of partners (degree) is: 2

click to view PPI network

Coexpression network

GSE45212_WT_PSTDC3000_AVRRPT2  view
GSE26679_WT_GC  view
GSE13739_WT_GO  view
GSE13739_EDS16_GO  view
GSE5686_WT_GO  view
GSE56094_WT_PSTDC3000  view
GSE45212_MED14_PSTDC3000_AVRRPT2  view
GSE26679_EDR1_GC  view

Differentially expressed condition

12 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE17500	Col, WT, control 0 h	Col, WT, PstDC3000 24 h	1.81	2.23E-06
GSE18978	Col, WT, control 24 h	Col, WT, PsmES4326 24 h	1.77	2.01E-08
GSE45212	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 12 h	2.34	3.20E-15
GSE45212	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 8 h	2.33	4.94E-15
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 4 h	2.24	6.60E-15
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 8 h	1.69	1.98E-13
GSE45214	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 4 h	1.68	2.86E-09
GSE45214	Col, med16, PstDC3000 AvrRpt2 0 h	Col, med16, PstDC3000 AvrRpt2 4 h	2.23	1.65E-11
GSE45214	Col, npr1, PstDC3000 AvrRpt2 0 h	Col, npr1, PstDC3000 AvrRpt2 4 h	1.69	3.59E-09
GSE5520	Col, WT, control 10 h	Col, WT, Cor- 10 h	1.87	1.02E-04
GSE9674	Ws-4, AtMYB30 ox, control	Ws-4, AtMYB30 ox, Xanthomonas strain Xcc147 6 h	1.60	5.83E-04
GSE9674	Ws-4, WT, control	Ws-4, WT, Xanthomonas strain Xcc147 6 h	1.56	8.31E-04