Gene: AT3G27380
Gene description
TAIR ID: AT3G27380
Short description: succinate dehydrogenase 2-1
Pathogen responsiveness: -1.21
General responsiveness: -0.90
Orthologous
Rice: No orthologous gene
Maize: No orthologous gene
Wheat: No orthologous gene
GO biological process
tricarboxylic acid cycle, respiratory electron transport chain, mitochondrial electron transport, succinate to ubiquinone, aerobic respiration
GO cellular component
mitochondrial inner membrane, mitochondrion, respiratory chain complex II
GO molecular function
succinate dehydrogenase activity, 4 iron, 4 sulfur cluster binding, succinate dehydrogenase (ubiquinone) activity, electron carrier activity, 3 iron, 2 iron, 2 sulfur cluster binding
Protein domain
| Pfam | PF13085, 2Fe-2S iron-sulfur cluster binding domain |
| Pfam | PF13534, 4Fe-4S dicluster domain |
Metabolic pathway
PWYQT-4481: TCA cycle variation V (plant)
PWY-4302: aerobic respiration (alternative oxidase pathway)
PWY-3781: aerobic respiration (cytochrome c)
PWY-5690: TCA cycle II (plants and fungi)
PWY-5464: superpathway of cytosolic glycolysis (plants), pyruvate dehydrogenase and TCA cycle
KEGG pathway
PATH:ath01200: Carbon metabolism
PATH:ath00020: Citrate cycle (TCA cycle)
PATH:ath00190: Oxidative phosphorylation
click to view PPI networkCoexpression network
Differentially expressed condition 
5 conditions
| Series | Control | Treatment | Log2FC | Adj. P value |
|---|---|---|---|---|
| GSE18978 | Col, WT, control 24 h | Col, WT, PsmES4326 24 h | 2.15 | 9.93E-10 |
| GSE50526 | Col, WT, mock 24 h | Col, WT, A. brassicicola 24 h | 2.58 | 3.12E-04 |
| GSE56094 | Col, WT, control 12 h | Col, WT, PstDC3000 12 h | 1.52 | 7.78E-12 |
| GSE56094 | Col, WT, control 13 h | Col, WT, PstDC3000 13 h | 1.95 | 6.52E-17 |
| GSE6556 | Col, gh3.5, control | Col, gh3.5, PstDC3000 AvrRpt2 48 h | 1.54 | 1.25E-04 |
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