gene detail

Gene description

TAIR ID: AT3G25710

Short description: basic helix-loop-helix 32

Pathogen responsiveness: -1.26

General responsiveness: -0.56

Orthologous

Rice: No orthologous gene

Maize: No orthologous gene

Wheat: No orthologous gene

GO biological process

anthocyanin-containing compound biosynthetic process, root development, regulation of transcription, DNA-templated, cellular response to phosphate starvation, root hair cell development, transcription

GO cellular component

nucleus

GO molecular function

protein dimerization activity, DNA binding, transcription factor activity, sequence-specific DNA binding

Protein domain

Pfam	PF00010, Helix-loop-helix DNA-binding domain
SMART	SM00353, HLH

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

Regulator:
AT5G61850

Target:
AT5G42800

Protein-protein interaction network

The number of partners (degree) is: 13 (Top20%)

click to view PPI network

Coexpression network

GSE45212_WT_PSTDC3000_AVRRPT2  view
GSE13739_WT_GO  view
GSE13739_EDS16_GO  view
GSE45212_MED14_PSTDC3000_AVRRPT2  view

Differentially expressed condition

5 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE20278	Col, RPL18-HF, control, polysomal RNA	Col, RPL18-HF, TuMV 10 d, polysomal RNA	-1.96	1.36E-03
GSE20278	Col, RPL18-HF, control	Col, RPL18-HF, TuMV 10 d	-1.63	2.43E-03
GSE37269	Ei2, WT, control	Ei2, WT, TEV 21 d	-2.20	1.82E-03
GSE37269	St0, WT, control	St0, WT, TEV 21 d	-2.05	1.95E-03
GSE58954	Col, WT, Psm AvrRpt2 0 h	Col, WT, Psm AvrRpt2 6 h	-1.58	8.09E-03