Gene: AT3G25150
     

Gene description


TAIR ID: AT3G25150

Short description: Nuclear transport factor 2 (NTF2) family protein with RNA binding (RRM-RBD-RNP motifs) domain

Pathogen responsiveness: -1.75

General responsiveness: -2.22

Orthologous


Rice: No orthologous gene
Maize: No orthologous gene
Wheat: No orthologous gene

GO biological process


nucleocytoplasmic transport


GO cellular component


cytoplasm, chloroplast


GO molecular function


unkown


Protein domain


PfamPF02136, Nuclear transport factor 2 (NTF2) domain
PfamPF00076, RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
SMARTSM00360, RRM

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT3G16857, AT4G16110, AT4G36990

Target:
none

Protein-protein interaction network


The number of partners (degree) is: 2

click to view PPI network

Differentially expressed condition


4 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE26679Col, WT, GC 0 hCol, WT, GC 18 h1.874.99E-12
GSE26679Col, WT, GC 0 hCol, WT, GC 36 h1.551.15E-10
GSE26679Col, edr1, GC 0 hCol, edr1, GC 18 h1.932.38E-12
GSE26679Col, edr1, GC 0 hCol, edr1, GC 36 h1.795.43E-12






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