gene detail

Gene description

TAIR ID: AT3G23210

Short description: basic helix-loop-helix (bHLH) DNA-binding superfamily protein

Pathogen responsiveness: -1.80

General responsiveness: -1.42

Orthologous

Rice: No orthologous gene

Maize: No orthologous gene

Wheat: No orthologous gene

GO biological process

regulation of transcription, DNA-templated, transcription

GO cellular component

nucleus

GO molecular function

protein dimerization activity, DNA binding, transcription factor activity, sequence-specific DNA binding

Protein domain

Pfam	PF00010, Helix-loop-helix DNA-binding domain
SMART	SM00353, HLH

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

Regulator:
AT5G61850

Target:
AT1G30490

Protein-protein interaction network

No Interactor

Coexpression network

GSE13739_WT_GO  view
GSE13739_EDS16_GO  view
GSE5686_WT_GO  view

Differentially expressed condition

2 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE40544	Col, Sid2, control	Col, Sid2, PstDC3000 AvrRpt2	-1.50	3.85E-04
GSE58954	Col, WT, Psm AvrRpt2 0 h	Col, WT, Psm AvrRpt2 6 h	-1.63	1.74E-03