gene detail

Gene description

TAIR ID: AT3G23150

Short description: Signal transduction histidine kinase, hybrid-type, ethylene sensor

Pathogen responsiveness: -1.26

General responsiveness: 1.35

Orthologous

Rice: No orthologous gene

Maize: No orthologous gene

Wheat:

TAAFFX.28783.1.S1_AT

GO biological process

negative regulation of ethylene-activated signaling pathway, ethylene-activated signaling pathway

GO cellular component

endoplasmic reticulum membrane, integral component of membrane, endoplasmic reticulum

GO molecular function

protein serine/threonine kinase activity, phosphorelay sensor kinase activity, protein histidine kinase activity, receptor activity, protein binding, metal ion binding, ethylene receptor activity, ATP binding

Protein domain

Pfam	PF00072, Response regulator receiver domain
Pfam	PF01590, GAF domain
SMART	SM00388, HisKA
SMART	SM00448, REC
SMART	SM00065, GAF

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

PATH:ath04016: MAPK signaling pathway - plant
PATH:ath04075: Plant hormone signal transduction

Transcriptional regulation

Regulator:
AT5G13790, AT4G36990

Target:
none

Protein-protein interaction network

The number of partners (degree) is: 13 (Top20%)

click to view PPI network

Coexpression network

GSE26679_WT_GC view

Differentially expressed condition

7 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE26679	Col, WT, GC 0 h	Col, WT, GC 36 h	1.78	1.31E-04
GSE26679	Col, edr1, GC 0 h	Col, edr1, GC 18 h	2.27	5.34E-06
GSE26679	Col, edr1, GC 0 h	Col, edr1, GC 36 h	3.03	3.69E-08
GSE26679	Col, edr1, GC 0 h	Col, edr1, GC 96 h	1.50	1.47E-03
GSE37269	Ei2, WT, control	Ei2, WT, TEV 21 d	-1.59	1.45E-02
GSE37269	St0, WT, control	St0, WT, TEV 21 d	-2.03	1.08E-03
GSE5520	Col, WT, control 7 h	Col, WT, PstDC3000 7 h	1.71	3.26E-04