Gene: AT3G22880
     


Gene description


TAIR ID: AT3G22880

Short description: DNA repair (Rad51) family protein

Pathogen responsiveness: -1.99

General responsiveness: -1.43

Orthologous


Rice:

OS11G0146800   OS11G0615800  

Maize:

GRMZM2G109618  

Wheat: No orthologous gene

GO biological process


reciprocal meiotic recombination, meiotic cell cycle, chiasma assembly, DNA repair, strand invasion, DNA recombinase assembly, mitotic recombination, DNA metabolic process, response to ionizing radiation


GO cellular component


nucleoplasm, nucleus, condensed nuclear chromosome


GO molecular function


protein binding, single-stranded DNA binding, endodeoxyribonuclease activity, ATP binding, DNA-dependent ATPase activity, four-way junction DNA binding, double-stranded DNA binding, recombinase activity


Protein domain


PfamPF08423, Rad51
SMARTSM00382, AAA

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT5G13790, AT2G02820, AT4G36990, AT1G14350

Target:
none

Protein-protein interaction network


The number of partners (degree) is: 12 (Top20%)

click to view PPI network

Coexpression network


No coexpression gene


Differentially expressed condition


2 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE37269Ei2, WT, controlEi2, WT, TEV 21 d-2.202.04E-03
GSE37269St0, WT, controlSt0, WT, TEV 21 d-3.311.56E-06






Copyright © 2017 Ziding Zhang's Lab - China Agricultural University. All Rights Reserved.