gene detail

Gene description

TAIR ID: AT3G19190

Short description: autophagy 2

Pathogen responsiveness: -1.77

General responsiveness: -2.75

Orthologous

Rice: No orthologous gene

Maize:

Wheat: No orthologous gene

GO biological process

autophagosome assembly, autophagy of mitochondrion, autophagy of nucleus, leaf senescence

GO cellular component

nucleus, pre-autophagosomal structure, extrinsic component of membrane

GO molecular function

molecular_function

Protein domain

Pfam	PF13329, Autophagy-related protein 2 CAD motif
Pfam	PF12624, N-terminal region of Chorein or VPS13
Pfam	PF09333, Autophagy-related protein C terminal domain

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

PATH:ath04136: Autophagy - other eukaryotes

Transcriptional regulation

Regulator:
AT5G61850

Target:
none

Protein-protein interaction network

The number of partners (degree) is: 1

Coexpression network

Differentially expressed condition

3 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE26679	Col, edr1, GC 0 h	Col, edr1, GC 18 h	1.65	1.64E-08
GSE26679	Col, edr1, GC 0 h	Col, edr1, GC 36 h	1.83	1.59E-09
GSE37269	Ei2, WT, control	Ei2, WT, TEV 21 d	-1.51	3.91E-02