Gene: AT3G16460
     

Gene description


TAIR ID: AT3G16460

Short description: Mannose-binding lectin superfamily protein

Pathogen responsiveness: 0.37

General responsiveness: 2.10

Orthologous


Rice: No orthologous gene
Maize: No orthologous gene
Wheat: No orthologous gene

GO biological process


response to cold


GO cellular component


nucleus, plasmodesma, cytosol, membrane


GO molecular function


carbohydrate binding


Protein domain


PfamPF01419, Jacalin-like lectin domain
SMARTSM00915, Jacalin

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT3G24050

Target:
none

Protein-protein interaction network


The number of partners (degree) is: 5

click to view PPI network

Differentially expressed condition


27 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE17500Col, 35S:AFB1, control 0 hCol, 35S:AFB1, PstDC3000 24 h2.935.40E-05
GSE17500Col, WT, control 0 hCol, WT, PstDC3000 24 h2.656.54E-05
GSE17500Col, miR393, control 0 hCol, miR393, PstDC3000 24 h2.018.55E-04
GSE26679Col, WT, GC 0 hCol, WT, GC 18 h1.811.49E-06
GSE26679Col, WT, GC 0 hCol, WT, GC 36 h2.148.87E-08
GSE26679Col, WT, GC 0 hCol, WT, GC 96 h1.584.20E-05
GSE26679Col, edr1, GC 0 hCol, edr1, GC 18 h1.654.93E-06
GSE26679Col, edr1, GC 0 hCol, edr1, GC 36 h2.135.85E-08
GSE26679Col, edr1, GC 0 hCol, edr1, GC 96 h2.031.23E-06
GSE37269Di2, WT, controlDi2, WT, TEV 21 d1.841.52E-02
GSE37269Ler0, WT, controlLer0, WT, TEV 21 d2.525.80E-05
GSE40544Col, WT, controlCol, WT, PstDC3000 hrcC-1.744.48E-02
GSE40544Col, WT, controlCol, WT, PstDC3000 EV2.354.27E-05
GSE40544Col, Sid2, controlCol, Sid2, PstDC3000 EV2.644.90E-05
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 4 h3.005.13E-07
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 8 h2.454.09E-06
GSE45214Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 4 h2.906.77E-09
GSE45214Col, med16, PstDC3000 AvrRpt2 0 hCol, med16, PstDC3000 AvrRpt2 4 h3.412.45E-10
GSE50526Col, WT, mock 24 hCol, WT, A. brassicicola 24 h2.816.45E-04
GSE5520Col, WT, control 24 hCol, WT, PstDC3000 24 h3.621.50E-05
GSE56094Col, WT, control 11 hCol, WT, PstDC3000 11 h1.763.50E-04
GSE56094Col, WT, control 12 hCol, WT, PstDC3000 12 h2.302.99E-06
GSE56094Col, WT, control 13 hCol, WT, PstDC3000 13 h2.532.36E-07
GSE56094Col, WT, control 8 hCol, WT, PstDC3000 8 h1.561.89E-03
GSE56094Col, WT, control 9 hCol, WT, PstDC3000 9 h2.228.72E-06
GSE6176Col, WT, control 12 hCol, WT, PstDC3000 12 h1.509.77E-03
GSE6556Col, gh3.5, controlCol, gh3.5, PstDC3000 AvrRpt2 48 h2.106.93E-03






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