Gene: AT3G13782
     

Gene description


TAIR ID: AT3G13782

Short description: nucleosome assembly protein1;4

Pathogen responsiveness: -1.16

General responsiveness: -1.97

Orthologous


Rice: No orthologous gene
Maize: No orthologous gene
Wheat: No orthologous gene

GO biological process


double-strand break repair via homologous recombination, response to cadmium ion, nucleosome assembly, nucleotide-excision repair


GO cellular component


cytoplasm, nucleus


GO molecular function


unkown


Protein domain


PfamPF00956, Nucleosome assembly protein (NAP)

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT4G16110, AT4G36990

Target:
none

Protein-protein interaction network


The number of partners (degree) is: 5

click to view PPI network

Differentially expressed condition


11 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE26679Col, edr1, GC 0 hCol, edr1, GC 18 h2.082.38E-03
GSE26679Col, edr1, GC 0 hCol, edr1, GC 36 h2.434.10E-04
GSE26679Col, edr1, GC 0 hCol, edr1, GC 96 h2.034.70E-03
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 12 h2.258.68E-14
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 8 h2.172.25E-13
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 12 h1.714.62E-12
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 4 h1.611.33E-11
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 8 h2.082.40E-13
GSE45214Col, med16, PstDC3000 AvrRpt2 0 hCol, med16, PstDC3000 AvrRpt2 4 h2.501.11E-11
GSE58954Col, WT, Psm AvrRpt2 0 hCol, WT, Psm AvrRpt2 6 h1.661.45E-03
GSE9674Ws-4, AtMYB30 ox, controlWs-4, AtMYB30 ox, Xanthomonas strain Xcc147 6 h1.991.17E-04






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