Gene: AT3G12990
     


Gene description


TAIR ID: AT3G12990

Short description: ribonuclease PH45A

Pathogen responsiveness: -2.83

General responsiveness: -2.46

Orthologous


Rice: No orthologous gene
Maize: No orthologous gene
Wheat: No orthologous gene

GO biological process


nuclear polyadenylation-dependent mRNA catabolic process, exonucleolytic nuclear-transcribed mRNA catabolic process involved in deadenylation-dependent decay, U4 snRNA 3'-end processing, U1 snRNA 3'-end processing, nuclear mRNA surveillance, nuclear polyadenylation-dependent rRNA catabolic process, U5 snRNA 3'-end processing, nuclear-transcribed mRNA catabolic process, exonucleolytic, 3'-5', nuclear polyadenylation-dependent tRNA catabolic process, wax biosynthetic process, RNA processing, exonucleolytic trimming to generate mature 3'-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)


GO cellular component


nuclear exosome (RNase complex), cytoplasm, exosome (RNase complex), cytoplasmic exosome (RNase complex), nucleus


GO molecular function


3'-5'-exoribonuclease activity, AU-rich element binding, protein dimerization activity


Protein domain


PfamPF03725, 3' exoribonuclease family, domain 2
PfamPF01138, 3' exoribonuclease family, domain 1

Metabolic pathway


Not involved in metabolic pathway


Transcriptional regulation


Regulator:
AT4G36990

Target:
none

Protein-protein interaction network


The number of partners (degree) is: 1

click to view PPI network

Differentially expressed condition


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